{"id":"W2122118888","doi":"10.1086/591128","title":"Large Community Outbreak of<i>Streptococcus pneumoniae</i>Serotype 5 Invasive Infection in an Impoverished, Urban Population","year":2008,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Pneumonia and Respiratory Infections","field":"Medicine","cited_by":66,"is_retracted":false,"has_abstract":true,"ca_institutions":"Vancouver Coastal Health; St. Paul's Hospital; University of British Columbia; Providence Health Care","funders":"Providence Health Care","keywords":"Streptococcus pneumoniae; Outbreak; Medicine; Pneumococcal disease; Serotype; Population; Pneumococcal infections; Disease; Environmental health; Virology; Internal medicine; Microbiology; Antibiotics; Biology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004464175,0.0002728418,0.0007571976,0.0003076123,0.0004212791,0.00001847267,0.0001059275,0.0003234168,0.00009280785],"category_scores_gemma":[0.001746518,0.0002544957,0.0004241208,0.0006171924,0.0002812727,0.0003898825,0.0000999819,0.0008961469,0.00004545138],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001477981,"about_ca_system_score_gemma":0.0002944516,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008718302,"about_ca_topic_score_gemma":0.003326431,"domain_scores_codex":[0.9970216,0.0009236452,0.001081418,0.0003656177,0.0002520769,0.0003556266],"domain_scores_gemma":[0.9976133,0.0005654219,0.0003762464,0.0007340432,0.0002730521,0.0004379265],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00005743009,0.005446087,0.9925199,0.0001134216,0.00007562106,0.00004693953,0.0002227276,0.00007537616,0.0007318881,0.00004917574,0.0002732777,0.0003882142],"study_design_scores_gemma":[0.002665027,0.002167573,0.993512,0.0001250445,0.000177529,0.00003323441,0.00006433208,0.00007643916,0.00009359123,0.0002699316,0.0005771636,0.0002380808],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9972767,0.00006136234,0.00003812608,0.00006061883,0.0005624438,0.0007869614,0.00008079033,0.0002790509,0.0008539798],"genre_scores_gemma":[0.9982052,0.0003036154,0.000001668786,0.0007624365,0.0003304137,0.00009858254,0.0002155181,0.00003955417,0.0000429988],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003278513,"threshold_uncertainty_score":0.9999907,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05540832762875629,"score_gpt":0.3679518546812926,"score_spread":0.3125435270525363,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}