{"id":"W2122482725","doi":"10.1371/journal.pone.0118205","title":"CRISPR-cas Subtype I-Fb in Acinetobacter baumannii: Evolution and Utilization for Strain Subtyping","year":2015,"lang":"en","type":"article","venue":"PLoS ONE","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":52,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Folkhälsomyndigheten; Umeå Centre for Microbial Research; Umeå Universitet; Vetenskapsrådet; Public Health Agency","keywords":"CRISPR; Biology; Acinetobacter baumannii; Horizontal gene transfer; Locus (genetics); Subtyping; Plasmid; Outbreak; Genetics; Genome; Virology; Gene; Bacteria","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001524985,0.00008451883,0.00009571653,0.0000441474,0.00001961377,0.00001306109,0.00004482104,0.00008806707,0.000002666391],"category_scores_gemma":[0.0001298349,0.00009250042,0.00001651211,0.00005386161,0.00001569204,0.000004702705,0.00002971491,0.00004349325,0.000001782054],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002287997,"about_ca_system_score_gemma":0.00003176219,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001533357,"about_ca_topic_score_gemma":0.0001361993,"domain_scores_codex":[0.9994377,0.00001376497,0.0001192064,0.0001885714,0.00007042933,0.0001703629],"domain_scores_gemma":[0.999718,0.000005636444,0.00002380979,0.0001210624,0.00007355917,0.00005794761],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001234797,0.0001969931,0.03533675,0.0001260806,0.00005531651,7.463028e-7,0.0002396002,0.0002194625,0.9620871,0.0002451471,0.0002371788,0.001132126],"study_design_scores_gemma":[0.003100121,0.0008188577,0.1528091,0.0001679347,0.0001108311,0.000007411069,0.0005447685,0.01712722,0.8216957,0.001151286,0.001884028,0.0005827144],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9556702,0.001363591,0.04245628,0.00008215203,0.00003738481,0.0002372677,0.00001556597,0.0000116754,0.0001258582],"genre_scores_gemma":[0.9968256,0.00009068653,0.002562955,0.00003545819,0.0001365678,0.0000253337,0.0001326838,0.00001609495,0.0001745857],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1403914,"threshold_uncertainty_score":0.3772058,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07402422341158875,"score_gpt":0.3104120681754087,"score_spread":0.23638784476382,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}