{"id":"W2123411559","doi":"10.1007/s10126-010-9284-0","title":"Comparative Genomics Identifies Candidate Genes for Infectious Salmon Anemia (ISA) Resistance in Atlantic Salmon (Salmo salar)","year":2010,"lang":"en","type":"article","venue":"Marine Biotechnology","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":53,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Victoria; Simon Fraser University","funders":"Natural Sciences and Engineering Research Council of Canada; Genome British Columbia; Genome Canada","keywords":"Biology; Synteny; Salmo; Contig; Genetics; Locus (genetics); Quantitative trait locus; Candidate gene; Genome; Bacterial artificial chromosome; Positional cloning; Gene; Comparative genomics; Infectious hematopoietic necrosis virus; Plant disease resistance; Genomics; Fishery","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000225526,0.0003685858,0.0005809925,0.0004336059,0.0002274231,0.00003983715,0.0005085368,0.0008933901,0.0002175536],"category_scores_gemma":[0.00007685498,0.0003528252,0.0001235812,0.0003376158,0.000517155,0.00009380087,0.0004472374,0.000688924,0.0002336211],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009070514,"about_ca_system_score_gemma":0.00005681186,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007906971,"about_ca_topic_score_gemma":0.03942391,"domain_scores_codex":[0.9981411,0.00006924072,0.0004579033,0.0006562041,0.00003130912,0.0006442727],"domain_scores_gemma":[0.9990159,0.00008950238,0.0002220923,0.0005688732,0.00007524756,0.00002842823],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003739587,0.0001738117,0.01549527,0.00009837405,0.0001579886,0.00002457121,0.0002180342,0.000002560804,0.9669974,0.006402097,0.008739108,0.001316839],"study_design_scores_gemma":[0.003189779,0.00018228,0.03528447,0.00003042378,0.0001602182,0.00006700665,0.0003368373,0.00001146262,0.4697738,0.002455254,0.487788,0.0007204319],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9935135,0.00106141,0.0001675815,0.001215897,0.001183311,0.0009678498,0.00007096921,0.0003306686,0.00148887],"genre_scores_gemma":[0.9935129,0.0002703865,0.0004755905,0.0001187548,0.00006276728,0.0001237095,0.0009198042,0.00003524396,0.004480843],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4972236,"threshold_uncertainty_score":0.9998924,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007962022202160886,"score_gpt":0.2364725794191853,"score_spread":0.2285105572170244,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}