{"id":"W2123497476","doi":"10.1128/aem.71.2.867-875.2005","title":"Comparison of Ileum Microflora of Pigs Fed Corn-, Wheat-, or Barley-Based Diets by Chaperonin-60 Sequencing and Quantitative PCR","year":2005,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":103,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; BC Centre for Disease Control; Genome Prairie; University of Saskatchewan; Plant Biotechnology Institute","funders":"","keywords":"Biology; Library; Primer (cosmetics); Polymerase chain reaction; Phylogenetic tree; Chaperonin; Ileum; Genetics; Bacteria; Gene; Biochemistry; 16S ribosomal RNA","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002401913,0.0003966151,0.0003258298,0.0004300952,0.0001285459,0.0003727624,0.0001307663,0.0001895402,0.0004642865],"category_scores_gemma":[0.0004230772,0.0001494073,0.0002503485,0.00031682,0.0001940364,0.0001851615,0.0001924714,0.0002222264,0.0001503568],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001333885,"about_ca_system_score_gemma":0.0001112176,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006894236,"about_ca_topic_score_gemma":0.0008586572,"domain_scores_codex":[0.9997929,0.00004222147,0.00001734011,0.00006007203,0.00005061569,0.0000368916],"domain_scores_gemma":[0.9996345,0.0001143093,0.0001036626,0.00002023566,0.00007182806,0.00005544216],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002626285,0.00002297328,0.001858016,0.00002891821,0.000008386651,0.00001247516,0.00002717119,0.00002532552,0.9962669,0.000006309072,0.000006352541,0.001474518],"study_design_scores_gemma":[0.0000236972,0.001944282,0.3959222,0.00002692455,0.0001019562,0.0002543472,0.0002446976,0.001857862,0.5985815,0.00006672731,0.0009526068,0.000023157],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.996919,0.0001376046,0.002184406,0.00001197728,0.000005474866,0.00001550174,0.000467554,0.0000164438,0.0002420341],"genre_scores_gemma":[0.986875,0.0004154391,0.008500719,0.00007667969,0.00001088132,0.00009737602,0.002294753,0.00004099368,0.001688324],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0006894236,"threshold_uncertainty_score":0.001553178,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01273596445964582,"score_gpt":0.2570544470755471,"score_spread":0.2443184826159013,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}