{"id":"W2123715799","doi":"","title":"A graph theoretical approach for analysis of protein flexibility change at protein complex formation.","year":2005,"lang":"en","type":"article","venue":"PubMed","topic":"Gene Regulatory Network Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"Hatch (Canada)","funders":"","keywords":"Computer science; Rigidity (electromagnetism); Biological system; Monomer; Intermolecular force; Graph; Complex network; Chemistry; Algorithm; Theoretical computer science; Molecule; Materials science; Biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006196739,0.0001569347,0.0003240462,0.0001583731,0.00008379103,0.00001186306,0.0002085099,0.0001358048,0.00003148468],"category_scores_gemma":[0.00006269602,0.0001398003,0.000454752,0.0005201254,0.0002128405,0.000007049804,0.0001108405,0.00003847267,7.530393e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004316774,"about_ca_system_score_gemma":0.00001053759,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000004328135,"about_ca_topic_score_gemma":0.00004585855,"domain_scores_codex":[0.9986165,0.0001049863,0.0003554419,0.0003820649,0.0001847087,0.0003563465],"domain_scores_gemma":[0.999027,0.000007305314,0.0001730932,0.0005433108,0.0001357083,0.0001136109],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.004478693,0.00372904,0.02099358,0.001451645,0.01908942,0.000001329238,0.000850533,0.02517256,0.5322612,0.04466362,0.0043769,0.3429315],"study_design_scores_gemma":[0.002889743,0.000279184,0.1646769,0.00000968893,0.003681886,0.00000539554,0.0001094621,0.146414,0.6581708,0.001908212,0.02066167,0.001193028],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9600294,0.0003710788,0.03546314,0.0002548279,0.000006591542,0.003217369,0.00008205614,0.00001742349,0.0005581194],"genre_scores_gemma":[0.9849887,0.000005579886,0.005780831,0.00007597478,0.0001562071,0.007974961,0.0007285883,0.00001562655,0.0002735135],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3417384,"threshold_uncertainty_score":0.570089,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04749408479396704,"score_gpt":0.2544467888216436,"score_spread":0.2069527040276765,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}