{"id":"W2124124166","doi":"10.5376/cge.2015.03.0007","title":"Genetic Variants Associated with DNA methylation","year":2015,"lang":"en","type":"article","venue":"Cancer Genetics and Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"DNA methylation; Genetics; Methylation; DNA; Biology; Computational biology; Gene; Gene expression","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003235712,0.0003235779,0.0002575431,0.00008302375,0.0001316875,0.00008455446,0.0001960149,0.0002722493,0.00001483362],"category_scores_gemma":[0.0001308052,0.0003028122,0.00005174904,0.0002297816,0.0001665699,0.000005389547,0.0001304743,0.0001133618,0.00000492499],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004709592,"about_ca_system_score_gemma":0.0002932037,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003804619,"about_ca_topic_score_gemma":0.0003125366,"domain_scores_codex":[0.9981159,0.0001240147,0.0003615769,0.0006026475,0.0003545922,0.0004412737],"domain_scores_gemma":[0.9984887,0.00002391163,0.0001949382,0.0004671297,0.0004270861,0.0003981966],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003781089,0.0003511293,0.4605038,0.00006657818,0.000717371,0.00002688864,0.001100076,0.0427043,0.3788246,0.000224322,0.00158787,0.1135149],"study_design_scores_gemma":[0.003888671,0.00258114,0.6330628,0.00008686806,0.0003647772,0.00001401206,0.000184747,0.005516578,0.2981006,0.004217567,0.05044545,0.001536789],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9623356,0.02326683,0.0127223,0.0001198393,0.0003095598,0.0003141196,0.00005310984,0.00002392998,0.0008547298],"genre_scores_gemma":[0.986374,0.008493389,0.003858738,0.0001695981,0.0003929119,0.00005561633,0.0001117943,0.0000784708,0.0004655471],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.172559,"threshold_uncertainty_score":0.9999424,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02787982382945921,"score_gpt":0.2745496208031183,"score_spread":0.2466697969736591,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}