{"id":"W2124564711","doi":"10.1093/cid/ciu133","title":"Increased HIV-1 Activity in Anal High-Grade Squamous Intraepithelial Lesions Compared With Unaffected Anal Mucosa in Men Who Have Sex With Men","year":2014,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Colorectal and Anal Carcinomas","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Medicine; Men who have sex with men; Human immunodeficiency virus (HIV); Anal sex; Anal canal; Anal cancer; Internal medicine; Gynecology; Gastroenterology; Immunology; Rectum","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000428924,0.0004003849,0.001205938,0.000337396,0.0001224785,0.00004581902,0.0001410439,0.0001914949,0.0000870657],"category_scores_gemma":[0.000748713,0.0002857397,0.0001787751,0.0006720305,0.0004953717,0.000140464,0.00008993152,0.0007425358,0.00001628203],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002145836,"about_ca_system_score_gemma":0.0003644644,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004208855,"about_ca_topic_score_gemma":0.01249438,"domain_scores_codex":[0.9969056,0.0007799239,0.0006117085,0.0007432741,0.0004199686,0.0005394787],"domain_scores_gemma":[0.9970518,0.001479317,0.0002119427,0.0004287023,0.0001154068,0.0007128275],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.003971801,0.003575493,0.9874001,0.00008641971,0.0001159994,0.0003616888,0.00007143403,0.0002478747,0.0002184902,0.0000467005,0.001091916,0.002812089],"study_design_scores_gemma":[0.01382355,0.004174473,0.9575786,0.000221764,0.0003564376,0.00003033773,0.000136558,0.02288616,0.0001859466,0.0001394966,0.00008456084,0.0003821399],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9947165,0.00003412047,0.0001527063,0.0005145972,0.0000304527,0.0007912756,0.00009513828,0.0001808674,0.003484312],"genre_scores_gemma":[0.9987422,0.00001575373,0.00001667561,0.0003258406,0.000393562,0.00009524076,0.0001547259,0.00004484036,0.0002112033],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02982152,"threshold_uncertainty_score":0.9999595,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01950529754330188,"score_gpt":0.3007916302980833,"score_spread":0.2812863327547814,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}