{"id":"W2124640614","doi":"10.1093/glycob/cwp173","title":"Mammalian Notch is modified by d-Xyl-α1-3-d-Xyl-α1-3-d-Glc-β1-O-Ser: Implementation of a method to study O-glucosylation","year":2009,"lang":"en","type":"article","venue":"Glycobiology","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":41,"is_retracted":false,"has_abstract":true,"ca_institutions":"Simon Fraser University","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Michael Smith Health Research BC","keywords":"Notch signaling pathway; Glycan; Chemistry; Glycosylation; Notch proteins; Trisaccharide; Biochemistry; Glycoprotein; Cell biology; Receptor; Biology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005571098,0.000291788,0.0003567976,0.0001268115,0.0001307017,0.00001188126,0.00026946,0.0003627549,0.0001488172],"category_scores_gemma":[0.0000259143,0.0002827986,0.0001081052,0.000233495,0.00005118981,0.00001054477,0.0001110312,0.0001015791,0.00003684217],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003739623,"about_ca_system_score_gemma":0.00006991749,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001110572,"about_ca_topic_score_gemma":0.0001109325,"domain_scores_codex":[0.9978239,0.0003433998,0.0005956045,0.0006982308,0.0001259256,0.0004129631],"domain_scores_gemma":[0.9990895,0.00002279527,0.000243098,0.0003979344,0.0001376025,0.0001090443],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004011293,0.0002240919,0.01799604,0.000006594203,0.0001267005,0.000001659677,0.000532005,0.00004632796,0.90614,0.0001192682,0.003737886,0.07066834],"study_design_scores_gemma":[0.001839839,0.002780533,0.147098,0.000004347989,0.00005147787,0.00002199541,0.0006286004,0.00002548551,0.8350395,0.0004396438,0.01168364,0.0003868833],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9837829,0.0002408758,0.01346283,0.0009246965,0.000235915,0.0008709907,0.0001183536,0.00002463147,0.0003387308],"genre_scores_gemma":[0.9919923,0.00002620812,0.004953327,0.001042991,0.0001231968,0.00006034022,0.001340308,0.00001758459,0.000443743],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.129102,"threshold_uncertainty_score":0.9999624,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009044899972332524,"score_gpt":0.325319220442605,"score_spread":0.3162743204702724,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}