{"id":"W2124693293","doi":"10.5376/cmb.2014.04.0002","title":"GC2 Biology Dictates Gene Expressivity in <i>Camellia sinensis</i>","year":2014,"lang":"en","type":"article","venue":"Computational Molecular Biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Codon usage bias; Gene; Biology; Genetics; Synonymous substitution; Gene expression; GC-content; Natural selection; Selection (genetic algorithm); Genome","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001731516,0.000203285,0.0002972429,0.0004117505,0.0001401968,0.000331667,0.0001663375,0.000170685,0.0004794951],"category_scores_gemma":[0.0002753868,0.0001320087,0.000255951,0.0003897649,0.0002649202,0.0001696395,0.0001539286,0.0002417001,0.0001960947],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000681638,"about_ca_system_score_gemma":0.0001724521,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001909142,"about_ca_topic_score_gemma":0.002101767,"domain_scores_codex":[0.9998616,0.00001491679,0.00001183955,0.0000510576,0.0000370437,0.000023506],"domain_scores_gemma":[0.9997739,0.00006899613,0.00006225248,0.00001920466,0.00003811051,0.00003758725],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006176285,0.000004974372,0.003399173,0.00001700632,0.000004883037,0.00002411259,0.00002018923,0.0001324606,0.9953121,0.00007912792,0.00002534353,0.0009189022],"study_design_scores_gemma":[0.00001844978,0.0002478643,0.2640215,0.00001122557,0.00004970465,0.0002272235,0.0001074882,0.01100987,0.7211338,0.0003498502,0.002795652,0.00002724315],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.997166,0.0002352945,0.001295283,0.00003230572,0.000005337588,0.000004524508,0.0005057249,0.00006602269,0.0006894118],"genre_scores_gemma":[0.997168,0.00006633593,0.001266448,0.00004478457,0.000004824838,0.0000113363,0.0008661045,0.00002936904,0.0005427948],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001909142,"threshold_uncertainty_score":0.004945636,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007743715591556165,"score_gpt":0.2476628474223675,"score_spread":0.2399191318308114,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}