{"id":"W2124815451","doi":"10.1091/mbc.12.10.3046","title":"Association of Human DEAD Box Protein DDX1 with a Cleavage Stimulation Factor Involved in 3′-End Processing of Pre-mRNA","year":2001,"lang":"en","type":"article","venue":"Molecular Biology of the Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":86,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"National Cancer Institute","keywords":"Biology; DEAD box; Cajal body; RNA-binding protein; Immunoprecipitation; RNA Helicase A; Nucleoplasm; Cell biology; RNA; Cleavage stimulation factor; RNA splicing; Polyadenylation; Molecular biology; Messenger RNA; Nuclear protein; Transcription factor; Nucleolus; Cytoplasm; Helicase; Biochemistry; Antibody; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002502047,0.0001049436,0.0001910872,0.00006420592,0.00003397666,0.00000384011,0.0002170037,0.0001753259,0.000005377251],"category_scores_gemma":[0.00008669919,0.00007730261,0.00006759947,0.0001550653,0.0001121908,0.00000412247,0.00008407685,0.0001076893,2.227378e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000026072,"about_ca_system_score_gemma":0.00007648802,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000159891,"about_ca_topic_score_gemma":0.0002023423,"domain_scores_codex":[0.9990088,0.0001833287,0.0002734874,0.0001945558,0.0001407338,0.0001990557],"domain_scores_gemma":[0.9992445,0.00001006891,0.0003539386,0.0002430476,0.0001211791,0.00002726254],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001638369,0.00008672324,0.1324014,0.00006596701,0.00002658617,9.224338e-7,0.00004755848,0.0001498874,0.8666912,0.000008592648,0.000007388369,0.0003499323],"study_design_scores_gemma":[0.000760227,0.0005120473,0.03072119,0.00005882929,0.00001154713,5.572908e-7,0.00003039497,0.000135477,0.9675509,0.0001017177,0.00003996783,0.0000771716],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9976093,0.0003075648,0.001378815,0.00006266228,0.000009303973,0.0003866228,0.000009172092,0.000002761002,0.0002338619],"genre_scores_gemma":[0.998983,0.00001160572,0.0004614478,0.00001658339,0.00001170939,0.00001195212,0.00003405816,0.00001251984,0.0004570934],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1016803,"threshold_uncertainty_score":0.3152309,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01012799147757446,"score_gpt":0.2714717125126027,"score_spread":0.2613437210350282,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}