{"id":"W2124829311","doi":"10.1186/1471-2164-14-s7-s3","title":"Ancient eudicot hexaploidy meets ancestral eurosid gene order","year":2013,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":47,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada; Gordon and Betty Moore Foundation","keywords":"Biology; Genome; Clade; Evolutionary biology; Gene; Lineage (genetic); Genetics; Ancestor; Phylogenetics; Phylogenetic tree","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000224944,0.0001676123,0.000164545,0.0002985496,0.0001980195,0.0003620654,0.0002445733,0.000218429,0.001076882],"category_scores_gemma":[0.0004182073,0.0001317112,0.0001723765,0.0003910226,0.0002478099,0.0002936782,0.0003139877,0.0002677076,0.0002093463],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003281394,"about_ca_system_score_gemma":0.0002090112,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009197465,"about_ca_topic_score_gemma":0.001629896,"domain_scores_codex":[0.9999027,0.000006332773,0.000008194263,0.00004953078,0.00002224379,0.00001088673],"domain_scores_gemma":[0.9997725,0.00005821984,0.0000627589,0.00004867123,0.00003652026,0.00002133418],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003522037,0.0000136628,0.05929973,0.0001926082,0.00003188577,0.0001173834,0.0002990431,0.00224526,0.9239363,0.001294308,0.0000660116,0.01215164],"study_design_scores_gemma":[0.00002798784,0.000414888,0.6955417,0.00004090547,0.0001215443,0.001039608,0.0004831993,0.02395342,0.2697628,0.002454428,0.006126442,0.00003302469],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9931222,0.0001512949,0.005682065,0.0000130497,0.000002459787,0.000006682589,0.0004081807,0.0000567042,0.0005574191],"genre_scores_gemma":[0.9914058,0.0000854637,0.007180894,0.00001450354,0.000001084128,0.00001203014,0.001002391,0.00002271631,0.0002751742],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001076882,"threshold_uncertainty_score":0.003602505,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03132220382024872,"score_gpt":0.2114677785365508,"score_spread":0.1801455747163021,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}