{"id":"W2124836116","doi":"10.1128/mbio.00909-14","title":"Preferential Packing of Acidic Glycosidases and Proteases into <i>Bacteroides</i> Outer Membrane Vesicles","year":2014,"lang":"en","type":"article","venue":"mBio","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":274,"is_retracted":false,"has_abstract":true,"ca_institutions":"Alberta Glycomics Centre; University of Alberta","funders":"Canadian Institutes of Health Research; Directorate for Biological Sciences; Natural Sciences and Engineering Research Council of Canada; Alberta Glycomics Centre; University of Alberta","keywords":"Bacteroides thetaiotaomicron; Bacterial outer membrane; Bacteroides fragilis; Proteases; Bacteroides; Microbiology; Bacteria; Biogenesis; Biology; Proteome; Vesicle; Membrane protein; Bacteroidaceae; Biochemistry; Chemistry; Enzyme; Membrane; Escherichia coli","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001413458,0.000395177,0.0002734778,0.0004004942,0.0002127964,0.000527109,0.0001706292,0.0003515802,0.0004614598],"category_scores_gemma":[0.0002721554,0.0002299207,0.0003635189,0.0002497921,0.0001835182,0.0004319493,0.0003574079,0.0002667834,0.0002807916],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000274898,"about_ca_system_score_gemma":0.0002122623,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008345025,"about_ca_topic_score_gemma":0.0004670413,"domain_scores_codex":[0.9998103,0.00002059435,0.00001582734,0.00006231712,0.00002748888,0.00006344407],"domain_scores_gemma":[0.999855,0.00001643003,0.00005336883,0.00001049064,0.00002044474,0.00004406662],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007955152,0.000006115563,0.001816076,0.00003432007,0.000007216801,0.0000703755,0.0000337147,0.00002060237,0.9971728,0.00005308342,0.00002014539,0.0006858342],"study_design_scores_gemma":[0.00001756265,0.0002583625,0.14982,0.00004924868,0.00005683651,0.001462181,0.0005011035,0.001614238,0.8428234,0.0002813787,0.003082764,0.00003288811],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.996784,0.000963326,0.001404377,0.00005855399,0.00001280244,0.000007500287,0.0001843368,0.00003063768,0.0005544579],"genre_scores_gemma":[0.9968641,0.0003901942,0.001823358,0.0000472528,0.000008539164,0.00001034109,0.0004398131,0.00001533913,0.0004010043],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008345025,"threshold_uncertainty_score":0.00199455,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01063750365482602,"score_gpt":0.2230418853286689,"score_spread":0.2124043816738429,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}