{"id":"W2124938008","doi":"10.1371/journal.pone.0102399","title":"Alternative Splicing of TAF6: Downstream Transcriptome Impacts and Upstream RNA Splice Control Elements","year":2014,"lang":"en","type":"article","venue":"PLoS ONE","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada; European Commission","keywords":"Minigene; RNA splicing; Biology; Transcriptome; Alternative splicing; RNA; Genetics; splice; Computational biology; Exon; Cell biology; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000143508,0.0002621663,0.0002154702,0.0002341088,0.0001980733,0.0003058912,0.000180795,0.000254785,0.001424588],"category_scores_gemma":[0.0001826019,0.0001227348,0.0003412106,0.0001344191,0.0002399885,0.0002076204,0.0001614228,0.0004952951,0.0003452642],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002730961,"about_ca_system_score_gemma":0.0001689177,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004029448,"about_ca_topic_score_gemma":0.0006989058,"domain_scores_codex":[0.9998212,0.00002034736,0.00001283676,0.00006860884,0.00004735683,0.00002969099],"domain_scores_gemma":[0.9998286,0.00004824307,0.00004005606,0.00002635593,0.00002181254,0.00003491779],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004059504,0.000005933063,0.0002399654,0.000008276259,0.000001379533,0.00001997368,0.000005438564,0.00002258987,0.9990548,0.000039564,0.000005525705,0.0005557889],"study_design_scores_gemma":[0.000003691918,0.00007510271,0.0137236,0.000004079307,0.00000937505,0.0002858686,0.00002633067,0.0007638431,0.9842831,0.0001072079,0.0007130823,0.000004689427],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9926625,0.0006634318,0.0054086,0.00006694831,0.00001684734,0.000009869284,0.0004843884,0.00005262667,0.0006348266],"genre_scores_gemma":[0.9934863,0.0002619325,0.003868584,0.00006379368,0.000007820628,0.00001685641,0.001079403,0.00003217156,0.001183196],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001424588,"threshold_uncertainty_score":0.004765689,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01602843667298625,"score_gpt":0.2479574994318523,"score_spread":0.231929062758866,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}