{"id":"W2125026835","doi":"10.1111/j.1365-2958.2012.08113.x","title":"DNA packaging bias and differential expression of gene transfer agent genes within a population during production and release of the <i>Rhodobacter capsulatus</i> gene transfer agent, RcGTA","year":2012,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":88,"is_retracted":false,"has_abstract":true,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Biology; Rhodobacter; Gene; Gene cluster; Gene expression; DNA; Molecular biology; DNA microarray; Population; Reporter gene; Genetics; Mutant","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001045628,0.0001713235,0.0002059285,0.00004104205,0.0001158734,0.00001019894,0.00008672191,0.0001087968,0.0001214737],"category_scores_gemma":[0.00001111471,0.0001282079,0.00008759498,0.00008494377,0.0001773299,0.0001365146,0.00008807048,0.0001142573,0.000002208764],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003888144,"about_ca_system_score_gemma":0.000003603194,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002365102,"about_ca_topic_score_gemma":0.00006523148,"domain_scores_codex":[0.9989073,0.0001889586,0.0003214618,0.0002954495,0.00005196656,0.0002348378],"domain_scores_gemma":[0.9996151,0.000007854585,0.00007282267,0.0002304922,0.00001140435,0.00006231703],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005737544,0.00008400166,0.01332354,0.00003565026,0.00002322072,0.000001093001,0.0008556126,0.00006469536,0.985266,0.000003318946,0.000007724841,0.0002778064],"study_design_scores_gemma":[0.0002506638,0.00002199072,0.1837081,0.00003485308,0.00006078914,0.0001178529,0.00002344664,0.000005131415,0.8155724,0.000002419034,0.00009445616,0.0001077871],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9979429,0.0003008147,0.0009326473,0.00007691129,0.0003642666,0.0003145248,0.00005045272,0.00001019068,0.000007318566],"genre_scores_gemma":[0.9994066,0.00007034505,0.0003043424,0.0000497094,0.00003737707,0.000008622698,0.00004204039,0.00001983767,0.00006107263],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1703846,"threshold_uncertainty_score":0.5228167,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01077453226791552,"score_gpt":0.2037447341236095,"score_spread":0.192970201855694,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}