{"id":"W2125245380","doi":"10.1128/jvi.75.23.11924-11929.2001","title":"An Intact U5-Leader Stem Is Important for Efficient Replication of Simian Immunodeficiency Virus","year":2001,"lang":"en","type":"article","venue":"Journal of Virology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; Jewish General Hospital","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Biology; Reversion; Viral replication; Simian immunodeficiency virus; Point mutation; Virology; Genetics; Ter protein; Virus; Mutant; Mutation; Origin of replication; Feline immunodeficiency virus; DNA replication; Molecular biology; DNA; Lentivirus; Gene; Viral disease; Phenotype","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002473425,0.0001995589,0.0003298344,0.0001330856,0.0002527233,0.000427695,0.0001489425,0.000346244,0.0009241395],"category_scores_gemma":[0.0005193158,0.0001267448,0.0002139663,0.00009938503,0.0002441367,0.0002237474,0.0002091302,0.0003456273,0.0005213758],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002517569,"about_ca_system_score_gemma":0.0003139446,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004391171,"about_ca_topic_score_gemma":0.0004541176,"domain_scores_codex":[0.9998185,0.0000456722,0.0000213488,0.00002260623,0.00005737401,0.00003455758],"domain_scores_gemma":[0.9997043,0.00006912515,0.00006351452,0.00003838517,0.00003102804,0.00009369907],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001446122,0.00003057,0.0007199809,0.00003441559,0.000003768915,0.0001385425,0.00001925171,0.0001059884,0.9950886,0.0001521693,0.00002926481,0.003532878],"study_design_scores_gemma":[0.00002798877,0.0007637948,0.01053119,0.00001380843,0.00002259047,0.001446702,0.00003932757,0.00111645,0.9825909,0.0001587986,0.003278141,0.00001040206],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9963875,0.0008643329,0.001737347,0.00005165183,0.00002433063,0.00001664994,0.00007964441,0.000064507,0.0007740514],"genre_scores_gemma":[0.9976915,0.0001330889,0.001682557,0.00001973407,0.00000730298,0.000005655584,0.000142512,0.000008639895,0.00030912],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009241395,"threshold_uncertainty_score":0.003091574,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02788961500918063,"score_gpt":0.3210638275226586,"score_spread":0.293174212513478,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}