{"id":"W2125256388","doi":"10.1101/gr.114595.110","title":"A spatial and temporal map of<i>C. elegans</i>gene expression","year":2010,"lang":"en","type":"article","venue":"Genome Research","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":287,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of Neurological Disorders and Stroke; National Institute of General Medical Sciences; National Cancer Institute; National Human Genome Research Institute; National Institute of Mental Health; National Heart, Lung, and Blood Institute; National Institutes of Health; Max-Planck-Gesellschaft; Deutsche Forschungsgemeinschaft; National Center for Research Resources; Genome British Columbia; Genome Canada; Vanderbilt University Medical Center; National Eye Institute; Vanderbilt University","keywords":"Biology; Gene; Gene expression; Genetics; Genome; Gene expression profiling; Computational biology; Promoter; Regulation of gene expression; Cell type; Cell","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007409435,0.0001151373,0.0001366717,0.0000919595,0.0001291982,0.00003260249,0.0002746518,0.0001881928,0.00009158115],"category_scores_gemma":[0.00006625045,0.0001080721,0.00004413706,0.00006268032,0.0002871403,0.000003056149,0.0003475979,0.0003086568,0.00002251919],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000005179988,"about_ca_system_score_gemma":0.0001143952,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002050071,"about_ca_topic_score_gemma":0.0001790429,"domain_scores_codex":[0.9986669,0.0001006108,0.0001780455,0.0003630846,0.0003230116,0.0003682971],"domain_scores_gemma":[0.9991014,0.00001567132,0.00004152313,0.0004879539,0.0002006043,0.0001528716],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004592922,0.00004838095,0.008427672,0.00003990727,0.0000117928,0.000003251931,0.0002241719,0.000003185265,0.9898781,0.00001953985,0.0004637747,0.0008342564],"study_design_scores_gemma":[0.0003367084,0.0002742322,0.008136181,0.000004527495,0.000004278714,0.00001220401,0.00005970172,0.0000262248,0.9479448,0.0002487733,0.04281894,0.0001333862],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9953371,0.0008421481,0.002882481,0.0002169563,0.0001453301,0.000212285,0.00002524198,0.000007032969,0.0003314262],"genre_scores_gemma":[0.9933459,0.0001561975,0.004906364,0.00002597557,0.0004365265,0.0000138959,0.00007151793,0.00002606032,0.001017631],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04235517,"threshold_uncertainty_score":0.4407052,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02226899835969483,"score_gpt":0.3010036531629536,"score_spread":0.2787346548032588,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}