{"id":"W2125419050","doi":"10.1002/prot.23116","title":"Structural analysis of CPF_2247, a novel α‐amylase from <i>Clostridium perfringens</i>","year":2011,"lang":"en","type":"article","venue":"Proteins Structure Function and Bioinformatics","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Victoria","funders":"National Research Council Canada; Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Michael Smith Health Research BC","keywords":"Glycoside hydrolase; Hydrolase; Active site; Biochemistry; Amylase; Oligosaccharide; Enzyme; Clostridium perfringens; Chemistry; Biology; Bacteria; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005318743,0.0001671696,0.0001940606,0.000149803,0.00008431693,0.00002204246,0.00008370951,0.0001527915,0.0002512662],"category_scores_gemma":[0.00003591345,0.0001390681,0.00007666949,0.0003067661,0.00007107035,0.00002259998,0.00006320688,0.00008696255,0.000001320576],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000007012684,"about_ca_system_score_gemma":0.0000266313,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004171131,"about_ca_topic_score_gemma":0.00004827538,"domain_scores_codex":[0.9991719,0.00001507018,0.0003435114,0.0001984113,0.000137321,0.0001337467],"domain_scores_gemma":[0.9992775,0.000002909896,0.0002450856,0.0002677633,0.0001337303,0.00007301016],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000250446,0.0000272061,0.006211504,0.00005072224,0.0005392525,1.157534e-7,0.000603994,0.00003327914,0.9879728,0.000157326,0.00007432816,0.004079023],"study_design_scores_gemma":[0.0007651227,0.0003609328,0.07950614,0.000009598902,0.0006631574,0.000007986236,0.0003772827,0.00334515,0.912093,0.0001059681,0.002456815,0.0003088874],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9705819,0.00008337739,0.02819431,0.00002774211,0.0002511407,0.0002354795,0.0003521293,0.00002165873,0.0002522398],"genre_scores_gemma":[0.9885281,0.00002996096,0.01000564,0.000179604,0.0001266862,0.000006209926,0.001033044,0.00001053735,0.00008020637],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07587984,"threshold_uncertainty_score":0.5671033,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01381557689992024,"score_gpt":0.1969264695446472,"score_spread":0.1831108926447269,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}