{"id":"W2125499531","doi":"10.1007/s00438-007-0311-4","title":"RpoS regulation of gene expression during exponential growth of Escherichia coli K12","year":2007,"lang":"en","type":"article","venue":"Molecular Genetics and Genomics","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":119,"is_retracted":false,"has_abstract":false,"ca_institutions":"Western University; McMaster University","funders":"Canadian Institutes of Health Research","keywords":"rpoS; Biology; Mutant; Gene; Escherichia coli; Exponential growth; Sigma factor; Operon; Genetics; Phenotype; Gene expression; Regulation of gene expression; Regulator; Promoter","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002882558,0.0005832876,0.0005745753,0.0004250959,0.0002413752,0.0008125439,0.0003241227,0.0003106703,0.0009576835],"category_scores_gemma":[0.0005851639,0.0002745492,0.00036697,0.0002993528,0.0005331221,0.0004716049,0.000471397,0.0007489788,0.000748178],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007510058,"about_ca_system_score_gemma":0.0003346475,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001692624,"about_ca_topic_score_gemma":0.00204731,"domain_scores_codex":[0.9996318,0.00005424396,0.00002692243,0.00007413945,0.00009504844,0.0001178002],"domain_scores_gemma":[0.9991626,0.0003111968,0.0001034243,0.00008707704,0.0002090209,0.0001267285],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006699148,0.00003851723,0.0003563879,0.00002569596,0.000001983186,0.00003877204,0.00004722561,0.0000453081,0.9974598,0.00007516916,0.00005250241,0.001188614],"study_design_scores_gemma":[0.00001013889,0.0001595191,0.01017188,0.000008749353,0.000005233199,0.00005550107,0.0001023432,0.0006826136,0.9882152,0.00005096155,0.0005295089,0.000008460896],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9938722,0.001093007,0.002441024,0.0001864082,0.0000387714,0.00002464965,0.0008350705,0.0001760138,0.001333014],"genre_scores_gemma":[0.9929558,0.0003905322,0.001867987,0.00008453846,0.00002657481,0.00003196796,0.001136309,0.0001105086,0.00339571],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001692624,"threshold_uncertainty_score":0.005448937,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004251151278855612,"score_gpt":0.1967118039607708,"score_spread":0.1924606526819152,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}