{"id":"W2125785650","doi":"10.1186/bcr1370","title":"Comprehensive copy number profiles of breast cancer cell model genomes","year":2006,"lang":"en","type":"article","venue":"Breast Cancer Research","topic":"Genomic variations and chromosomal abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":100,"is_retracted":false,"has_abstract":true,"ca_institutions":"BC Cancer Agency","funders":"Genome British Columbia; Genome Canada","keywords":"Surgical oncology; Breast cancer; Computational biology; Copy-number variation; Genome; Medicine; Cancer; Oncology; Bioinformatics; Biology; Internal medicine; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001408196,0.0002214082,0.0002113918,0.000798435,0.0001855407,0.0002744855,0.0002026219,0.0002056502,0.001216223],"category_scores_gemma":[0.0002980883,0.0001195142,0.0002083617,0.0007596231,0.000121153,0.0001476421,0.0002488215,0.0002743409,0.0002919348],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002781214,"about_ca_system_score_gemma":0.0001481532,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001155938,"about_ca_topic_score_gemma":0.0014829,"domain_scores_codex":[0.9998515,0.00001317678,0.00001101748,0.00004881398,0.00005328478,0.00002226054],"domain_scores_gemma":[0.9998034,0.00006125485,0.00003611539,0.00003141373,0.00005040769,0.00001747772],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007557138,0.0000118861,0.003024922,0.00004113842,0.00001385996,0.00002966448,0.00002801691,0.0004277827,0.9915803,0.00007131751,0.00006611896,0.004629377],"study_design_scores_gemma":[0.000009816584,0.000354175,0.06480764,0.000005803722,0.00008853752,0.0005906807,0.00006275089,0.00541745,0.9231266,0.0001774128,0.005342035,0.00001697267],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9734645,0.001165954,0.01858577,0.00005439221,0.000008920407,0.00006419558,0.004941115,0.0003174672,0.001397595],"genre_scores_gemma":[0.9498888,0.001097471,0.02663651,0.00005792979,0.000005648285,0.0001429271,0.02034849,0.0000778109,0.001744302],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001216223,"threshold_uncertainty_score":0.004068732,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02464903353915993,"score_gpt":0.3187580653616249,"score_spread":0.294109031822465,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}