{"id":"W2125835995","doi":"10.1128/jvi.00643-11","title":"Systematic Analysis of the Amino Acid Residues of Human Papillomavirus Type 16 E7 Conserved Region 3 Involved in Dimerization and Transformation","year":2011,"lang":"en","type":"article","venue":"Journal of Virology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":true,"ca_institutions":"London Health Sciences Centre; Western University","funders":"Canadian Institutes of Health Research; Associazione Italiana per la Ricerca sul Cancro","keywords":"Mutant; Biology; Transformation (genetics); Bovine papillomavirus; Mutation; Cell biology; Dimer; Carcinogenesis; HEK 293 cells; Plasma protein binding; Cell; Immunoprecipitation; Genetics; Cell culture; Gene; Genome; Chemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004787701,0.00005014855,0.0005043316,0.0003485961,0.000018967,0.00000188948,0.00007320993,0.00007456425,0.0001076982],"category_scores_gemma":[0.0001486087,0.0000302471,0.00009448501,0.0004125316,0.0001221901,0.00005844012,0.00001253486,0.000139299,2.098452e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003367191,"about_ca_system_score_gemma":0.00004537405,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001910696,"about_ca_topic_score_gemma":0.0007647949,"domain_scores_codex":[0.998836,0.0002365143,0.0006211788,0.00004995292,0.0001818567,0.00007445934],"domain_scores_gemma":[0.9991556,0.00006897135,0.0003963823,0.0001190323,0.0002237809,0.00003621683],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.004156434,0.0003723343,0.6533813,0.007385436,0.001602903,0.00002270135,0.008677013,0.00001591425,0.3221914,0.001265006,0.00004103138,0.0008885156],"study_design_scores_gemma":[0.001175724,0.001007123,0.9658125,0.0002887866,0.00097593,0.00001817989,0.0004481036,0.0001746193,0.02971855,0.0003501493,0.000002427796,0.00002792219],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980123,0.0008966961,0.0001205747,0.0002127898,0.00003008331,0.0001618066,8.893384e-7,0.000001282845,0.0005635884],"genre_scores_gemma":[0.99956,0.0003181812,0.00001728665,0.00007375419,0.00001133111,0.000001494139,0.000002197526,0.000003537022,0.00001220957],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3124312,"threshold_uncertainty_score":0.1233441,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07267403292903953,"score_gpt":0.3259439345163088,"score_spread":0.2532699015872693,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}