{"id":"W2125960956","doi":"10.1128/aem.00128-11","title":"Bacteriophages LIMElight and LIMEzero of Pantoea agglomerans, Belonging to the “phiKMV-Like Viruses”","year":2011,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":55,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"Vlaamse regering; Fonds Wetenschappelijk Onderzoek","keywords":"Biology; Pantoea agglomerans; Pantoea; Genome; Myoviridae; Context (archaeology); Lytic cycle; Bacteriophage; Bacterial virus; ORFS; Microbiology; Genetics; Open reading frame; Bacteria; Gene; Virus; Pseudomonas; Escherichia coli","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000913343,0.0002783954,0.0001577648,0.0004642422,0.0002925388,0.0003049007,0.00009761612,0.0002213704,0.0008043143],"category_scores_gemma":[0.0002138786,0.00007791234,0.000133488,0.0003466121,0.0002364657,0.0002315064,0.0003755258,0.0001932102,0.0002229701],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003086846,"about_ca_system_score_gemma":0.0003850356,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001937736,"about_ca_topic_score_gemma":0.002452885,"domain_scores_codex":[0.9998767,0.00001686236,0.000004968834,0.00004982512,0.00002910506,0.0000224846],"domain_scores_gemma":[0.999895,0.00003128941,0.00002948144,0.000007277681,0.00001981428,0.00001718772],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003632378,0.00003655946,0.01665423,0.0003419659,0.00001342852,0.0004277555,0.0004438684,0.0002026568,0.9541368,0.0004013713,0.0002263671,0.02675158],"study_design_scores_gemma":[0.00004719956,0.0009216172,0.6022477,0.00009784398,0.00005864603,0.004318959,0.001579061,0.002629059,0.3344989,0.0008705847,0.05268289,0.00004753428],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9916683,0.001446862,0.00249366,0.0001181027,0.0000150597,0.00003945614,0.0004995476,0.00005855559,0.003660496],"genre_scores_gemma":[0.9888864,0.0008780988,0.00380932,0.00005712317,0.000008770672,0.00003850446,0.001846832,0.0000172313,0.004457973],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001937736,"threshold_uncertainty_score":0.003852963,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008415771163633423,"score_gpt":0.1806277041305955,"score_spread":0.1722119329669621,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}