{"id":"W2126098479","doi":"10.1128/jvi.75.16.7230-7243.2001","title":"Hydrophobic Amino Acids in the Human Immunodeficiency Virus Type 1 p2 and Nucleocapsid Proteins Can Contribute to the Rescue of Deleted Viral RNA Packaging Signals","year":2001,"lang":"en","type":"article","venue":"Journal of Virology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research","keywords":"Biology; RNA; Amino acid; Nucleotide; Virology; Point mutation; Mutation; Molecular biology; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001305306,0.0003435174,0.0001551554,0.00007895487,0.0001483184,0.0001759255,0.0001994781,0.0002670675,0.0008219312],"category_scores_gemma":[0.0001224913,0.0001290151,0.0002165403,0.00009776079,0.000247148,0.0001248968,0.0002458531,0.0003981467,0.0003181912],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001991002,"about_ca_system_score_gemma":0.0001958236,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004665687,"about_ca_topic_score_gemma":0.0007427025,"domain_scores_codex":[0.9999207,0.00002142531,0.000008172333,0.00001276031,0.0000184961,0.0000183939],"domain_scores_gemma":[0.9999087,0.0000232734,0.00002104314,0.00001139137,0.000004671045,0.00003092793],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001312375,0.00002480184,0.0001197327,0.00001873173,0.000002908165,0.0001065423,0.000008086778,0.00006863856,0.9990065,0.00007504228,0.00001324216,0.0004247684],"study_design_scores_gemma":[0.00004811503,0.0003162539,0.004309505,0.000005306311,0.00001798671,0.0004689217,0.00002327097,0.001349612,0.9911971,0.00006469098,0.002192529,0.000006827267],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983848,0.0002176357,0.0007900227,0.00002269716,0.000008528791,0.00001355997,0.00007325419,0.00001594473,0.0004735552],"genre_scores_gemma":[0.9971921,0.0001702449,0.001115151,0.00002401246,0.000005195238,0.00001865587,0.0002768374,0.00001596202,0.001181901],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008219312,"threshold_uncertainty_score":0.002749562,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01619061037434838,"score_gpt":0.2768156815796056,"score_spread":0.2606250712052572,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}