{"id":"W2126183097","doi":"10.1128/jcm.00502-11","title":"Rapid Identification of Cryptococcus neoformans var. grubii, C. neoformans var. neoformans, and C. gattii by Use of Rapid Biochemical Tests, Differential Media, and DNA Sequencing","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":63,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; Hospital for Sick Children; BC Centre for Disease Control; University of Toronto; Toronto Public Health","funders":"","keywords":"Cryptococcus neoformans; Cryptococcus gattii; Biology; Cryptococcosis; Microbiology; Cryptococcus; Agar; Genetics; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001076974,0.0002359276,0.001219461,0.0002182915,0.00009241193,0.00001278649,0.0001334816,0.0003872687,0.0001510159],"category_scores_gemma":[0.0009005055,0.0001708274,0.0002947763,0.0001418696,0.0009207361,0.0002404066,0.0001348431,0.0006008602,0.000003231599],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003399561,"about_ca_system_score_gemma":0.0001211329,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004356524,"about_ca_topic_score_gemma":0.000007724217,"domain_scores_codex":[0.9965886,0.0001694369,0.002557112,0.0002450593,0.0001050246,0.0003347419],"domain_scores_gemma":[0.9968428,0.0008085145,0.001428427,0.0002368091,0.0004676398,0.0002158107],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001031735,0.0005425681,0.04323178,0.0002149183,0.0005380797,0.00001016912,0.0008453235,3.184652e-7,0.939836,0.0000710102,0.006525835,0.007152303],"study_design_scores_gemma":[0.01223206,0.01122005,0.4774262,0.0008528243,0.002220119,0.0029997,0.001079397,0.0002197811,0.4754657,0.0005682003,0.01497256,0.0007434455],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9965369,0.001517942,0.0005903987,0.0002407753,0.0006649798,0.0002481721,0.00009290296,0.00001120749,0.00009674791],"genre_scores_gemma":[0.9926561,0.005684481,0.001124252,0.0001780594,0.0002478458,0.000003768232,0.00003893531,0.0000176734,0.00004895636],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4643703,"threshold_uncertainty_score":0.6966139,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0833645888125776,"score_gpt":0.3229101900109183,"score_spread":0.2395456011983406,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}