{"id":"W2126307925","doi":"10.1105/tpc.104.028332","title":"The Arabidopsis <i>HOMOLOGY-DEPENDENT GENE SILENCING1</i> Gene Codes for an <i>S</i> -Adenosyl-l-Homocysteine Hydrolase Required for DNA Methylation-Dependent Gene Silencing","year":2005,"lang":"en","type":"article","venue":"The Plant Cell","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":169,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Waterloo","funders":"Arizona Biomedical Research Commission","keywords":"Biology; Arabidopsis; Gene; Homology (biology); Genetics; DNA methylation; Gene silencing; Methylation; Gene expression; Mutant","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006632203,0.0006525556,0.0002118995,0.0003369589,0.0002539258,0.0002722198,0.0003958106,0.0003204828,0.002062431],"category_scores_gemma":[0.00009393471,0.0002192097,0.0004222391,0.0002323944,0.000322645,0.0001666838,0.0002497537,0.0004822118,0.001523514],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006876486,"about_ca_system_score_gemma":0.0003227367,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001988098,"about_ca_topic_score_gemma":0.002357772,"domain_scores_codex":[0.9999073,0.000007389511,0.000005948458,0.00003074529,0.00003301443,0.00001557611],"domain_scores_gemma":[0.9998854,0.00001203284,0.00004542764,0.00001343889,0.000009204256,0.00003444926],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000209256,0.000004486605,0.0001369686,0.00001932104,0.000002719948,0.00004956352,0.000006466383,0.00003000451,0.9978593,0.0001277392,0.00009164199,0.001650854],"study_design_scores_gemma":[0.00002860656,0.0002232915,0.0131101,0.000009233495,0.00003282743,0.0008559775,0.00003142727,0.001519655,0.9628243,0.0001943314,0.0211486,0.00002164945],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9423515,0.002729751,0.03384472,0.0003834512,0.0002549867,0.000199391,0.006700756,0.00421103,0.009324404],"genre_scores_gemma":[0.9622656,0.0007802579,0.01231222,0.0001744183,0.00003409226,0.00009037208,0.008795336,0.0003291759,0.01521854],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002062431,"threshold_uncertainty_score":0.006899536,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03259903099836045,"score_gpt":0.2463858446568817,"score_spread":0.2137868136585212,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}