{"id":"W2126374487","doi":"10.1128/cvi.00242-08","title":"Expression of Antimicrobial Peptides in Cecal Tonsils of Chickens Treated with Probiotics and Infected with <i>Salmonella enterica</i> Serovar Typhimurium","year":2008,"lang":"en","type":"article","venue":"Clinical and Vaccine Immunology","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":93,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph; Agriculture and Agri-Food Canada","funders":"Natural Sciences and Engineering Research Council of Canada; Ferdowsi University of Mashhad; Poultry Industry Council","keywords":"Salmonella; Salmonella enterica; Probiotic; Microbiology; Biology; Antimicrobial; Antimicrobial peptides; Serotype; Cathelicidin; Beta defensin; Salmonella infection; Bacteria; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001408251,0.0002842647,0.0003374261,0.0002529672,0.000183123,0.0004222204,0.0001176597,0.0003356494,0.0007188431],"category_scores_gemma":[0.0002003668,0.0002451125,0.0003360486,0.0001105905,0.0004586354,0.0002678873,0.0001521128,0.0006986697,0.0002057887],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002951794,"about_ca_system_score_gemma":0.0001986936,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00108975,"about_ca_topic_score_gemma":0.001432801,"domain_scores_codex":[0.9998552,0.00001633938,0.00001567669,0.00004573847,0.00002535725,0.00004158217],"domain_scores_gemma":[0.9996833,0.00006933868,0.00008264664,0.00001742289,0.00004663176,0.0001006614],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000465576,0.00002323556,0.0006342941,0.00003903523,0.00000487317,0.00004466734,0.00005031077,0.00001364162,0.9984218,0.000009611525,0.00001187995,0.0002810011],"study_design_scores_gemma":[0.00007247891,0.003818824,0.2137066,0.00005024721,0.0001216553,0.0005806433,0.001379412,0.001030883,0.7776076,0.00005788075,0.001539261,0.00003452291],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.998304,0.0004762782,0.0003080663,0.00004332435,0.00002814245,0.00001808314,0.0002944028,0.00001150918,0.0005161964],"genre_scores_gemma":[0.9942959,0.0006602647,0.001591744,0.0001622056,0.00001891603,0.000087844,0.0008774935,0.0000214871,0.002284234],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00108975,"threshold_uncertainty_score":0.002404749,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0154806955525911,"score_gpt":0.2437284273514597,"score_spread":0.2282477317988686,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}