{"id":"W2126534542","doi":"10.15252/embj.201591163","title":"Chimeric adaptor proteins translocate diverse type VI secretion system effectors in Vibrio cholerae","year":2015,"lang":"en","type":"article","venue":"The EMBO Journal","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":146,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Alberta","funders":"Studienstiftung des Deutschen Volkes; Deutscher Akademischer Austauschdienst; Canadian Institutes of Health Research; Alberta Innovates; Alberta Innovates - Health Solutions","keywords":"Type VI secretion system; Effector; Vibrio cholerae; Biology; Secretion; Signal transducing adaptor protein; Cell biology; Microbiology; Virulence; Bacteria; Genetics; Gene; Signal transduction; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007855819,0.0001374331,0.000159492,0.00005564356,0.0001410953,0.00005755396,0.0002567243,0.00005975701,0.00000869331],"category_scores_gemma":[0.0001100755,0.00009024658,0.00006806516,0.000152987,0.00008057455,0.0000094795,0.00009244227,0.0002497585,0.00003036384],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008850721,"about_ca_system_score_gemma":0.0001539504,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006025273,"about_ca_topic_score_gemma":0.00004497086,"domain_scores_codex":[0.9987882,0.0003226866,0.000188843,0.0001596251,0.0002449715,0.0002957195],"domain_scores_gemma":[0.9994355,0.000009179806,0.00008458034,0.0002013056,0.00012853,0.0001408663],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0007687224,0.0000581012,0.002605077,0.00004894671,0.0001800822,0.00004314517,0.0007574016,0.0002741975,0.9920637,0.00001712313,0.001686387,0.001497091],"study_design_scores_gemma":[0.02430205,0.01218731,0.2248056,0.001507805,0.000464509,0.003714192,0.01234809,0.005598688,0.6270522,0.0002618373,0.08488432,0.002873442],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9973686,0.000890775,0.0002993182,0.0002789637,0.0003750412,0.0003269604,0.000006255331,0.00001106169,0.0004429673],"genre_scores_gemma":[0.9989901,0.0001410915,0.0000866335,0.00003342511,0.0005556598,0.00001748932,0.00001137022,0.00001808544,0.0001461226],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3650115,"threshold_uncertainty_score":0.3680149,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02906291196328213,"score_gpt":0.2737772533958143,"score_spread":0.2447143414325321,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}