{"id":"W2126698647","doi":"10.1155/2000/138230","title":"Restriction Enzyme Analysis of DNA Methylation in “Condensed” Chromatin of Ha‐<i>Ras</i>‐Transformed NIH 3T3 Cells","year":2000,"lang":"en","type":"article","venue":"Analytical Cellular Pathology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"Western University","funders":"National Cancer Institute; Fundação de Amparo à Pesquisa do Estado de São Paulo; Emory University; Universidade Estadual de Campinas; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Alexander von Humboldt-Stiftung","keywords":"Chromatin; DNA methylation; DNA; CpG site; Molecular biology; Biology; Methylation; Histone-modifying enzymes; Cell biology; Chemistry; Chromatin remodeling; Genetics; Gene expression; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005674101,0.000168009,0.0004805105,0.0003896775,0.00002751322,0.000005724112,0.0001422829,0.0003021735,0.0003017564],"category_scores_gemma":[0.0000785611,0.0001706242,0.0002710252,0.0008804129,0.0001517374,0.000006442281,0.0000234839,0.0001161419,0.00000795916],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001877654,"about_ca_system_score_gemma":0.00005132989,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00009295378,"about_ca_topic_score_gemma":0.0001523116,"domain_scores_codex":[0.9981256,0.0002805351,0.0007419764,0.000398035,0.0001984747,0.000255344],"domain_scores_gemma":[0.9991796,0.00006662652,0.0001786781,0.0003966024,0.0001069829,0.00007151978],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008347938,0.0001464577,0.003786275,0.00002218959,0.0001751647,0.00001315532,0.0000776883,0.00494551,0.9883896,0.0001690589,0.00001297874,0.00217848],"study_design_scores_gemma":[0.0005045541,0.0003583662,0.0185536,0.000006777808,0.0004651711,0.000001094696,0.00003137198,0.009228699,0.9699042,0.0003257485,0.0004591085,0.0001613363],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9866346,0.0006918675,0.01036536,0.00004880378,0.00004414297,0.0001553552,0.00003453886,0.000005941639,0.002019358],"genre_scores_gemma":[0.9978621,0.0007033118,0.0005809537,0.0000309902,0.00003867485,0.000006695451,0.0003770507,0.00001556497,0.0003846509],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0184854,"threshold_uncertainty_score":0.6957852,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01038645700847638,"score_gpt":0.251831286746212,"score_spread":0.2414448297377356,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}