{"id":"W2127114793","doi":"10.1128/mbio.00679-15","title":"Burkholderia cenocepacia Lipopolysaccharide Modification and Flagellin Glycosylation Affect Virulence but Not Innate Immune Recognition in Plants","year":2015,"lang":"en","type":"article","venue":"mBio","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"ca_institutions":"Western University","funders":"Natural Sciences and Engineering Research Council of Canada; Cystic Fibrosis Trust; Cystic Fibrosis Canada","keywords":"Burkholderia cenocepacia; Flagellin; Microbiology; Biology; Virulence; Innate immune system; Pattern recognition receptor; Immune system; Bacteria; Immunology; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009016072,0.0002905345,0.0001430932,0.00007929336,0.0001258916,0.0001850692,0.0001475415,0.0002696269,0.0006203582],"category_scores_gemma":[0.00007185547,0.00006739472,0.0001146184,0.0000841734,0.0002127845,0.000165306,0.0001723021,0.0003194076,0.0001403025],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002977344,"about_ca_system_score_gemma":0.0001330556,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005457706,"about_ca_topic_score_gemma":0.0005074322,"domain_scores_codex":[0.9999363,0.00001191439,0.000005244345,0.00001703393,0.00001209355,0.00001737872],"domain_scores_gemma":[0.999882,0.00002278784,0.00004453643,0.000009480527,0.0000109484,0.00003019308],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009163399,0.0000105559,0.0005555666,0.00002152241,0.000002128799,0.00002485006,0.000009240232,0.00002409106,0.998808,0.00001950061,0.000007023199,0.0004257207],"study_design_scores_gemma":[0.00002614647,0.0004356149,0.0614107,0.000009066699,0.00002200546,0.0003284505,0.00009576018,0.0007715552,0.9349002,0.0001336854,0.001857436,0.000009445371],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980124,0.0008700892,0.0005922918,0.00006220145,0.0000108588,0.000006243605,0.000116859,0.00001944146,0.0003095889],"genre_scores_gemma":[0.998615,0.0002557283,0.0004152517,0.00004222156,0.000002659518,0.00000628479,0.000123584,0.000004418356,0.0005348601],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0006203582,"threshold_uncertainty_score":0.002160251,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03743673283672354,"score_gpt":0.2591468580513008,"score_spread":0.2217101252145772,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}