{"id":"W2127212608","doi":"10.1099/mic.0.28057-0","title":"Conserved indels in essential proteins that are distinctive characteristics of Chlamydiales and provide novel means for their identification","year":2005,"lang":"en","type":"article","venue":"Microbiology","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":39,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Chlamydiae; Biology; Chlamydiales; Chlamydophila; Genetics; Chlamydiaceae; Gene; Phylogenetic tree; Chlamydia","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002660116,0.0004269019,0.0004083511,0.0008736948,0.0003692514,0.0003719571,0.0003220141,0.0004702591,0.001643673],"category_scores_gemma":[0.0007798876,0.0002277888,0.0005091393,0.000818905,0.0004364132,0.0003017307,0.0003550221,0.0006975965,0.0008569595],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001581966,"about_ca_system_score_gemma":0.0002674229,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002341363,"about_ca_topic_score_gemma":0.0005592774,"domain_scores_codex":[0.9997552,0.00003084457,0.00003165074,0.0000784386,0.00007855395,0.00002529255],"domain_scores_gemma":[0.9988961,0.0003611572,0.0004196899,0.0001367902,0.00007567242,0.0001105321],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0006192834,0.0001066899,0.01066728,0.0005087033,0.000133065,0.002335157,0.0002301807,0.0003313595,0.9647442,0.0003887522,0.0001814436,0.01975382],"study_design_scores_gemma":[0.0001199373,0.0009895669,0.4655018,0.0002063095,0.0005799278,0.02216924,0.0003772831,0.002780274,0.4835571,0.001387033,0.02222376,0.0001077539],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9751691,0.004046112,0.01595077,0.0001191185,0.0001209462,0.00007415525,0.002065434,0.0003144955,0.002140071],"genre_scores_gemma":[0.9785939,0.0009860682,0.01540379,0.0001196809,0.00005898038,0.00007414918,0.003174362,0.00007080319,0.00151821],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001643673,"threshold_uncertainty_score":0.005498707,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03199214436143243,"score_gpt":0.2765892400503623,"score_spread":0.2445970956889298,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}