{"id":"W2127256962","doi":"10.1002/0471250953.bi0910s50","title":"Installing a Local Copy of the Reactome Web Site and Knowledgebase","year":2015,"lang":"en","type":"article","venue":"Current Protocols in Bioinformatics","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ontario Institute for Cancer Research","funders":"National Human Genome Research Institute","keywords":"Computer science; World Wide Web; Software; Web site; Field (mathematics); Source code; Web browser; Code (set theory); Information retrieval; The Internet; Programming language; Set (abstract data type)","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004313691,0.002566042,0.002634131,0.005440382,0.001297374,0.002658793,0.004182009,0.002356375,0.2562745],"category_scores_gemma":[0.01133532,0.002789753,0.002517118,0.004375557,0.0005702377,0.00345124,0.004979715,0.003216003,0.3260314],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009978019,"about_ca_system_score_gemma":0.002421907,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002644458,"about_ca_topic_score_gemma":0.004559344,"domain_scores_codex":[0.9968703,0.0002864547,0.0002620353,0.00082054,0.001558136,0.0002024802],"domain_scores_gemma":[0.9918629,0.001682009,0.0004237031,0.003734873,0.001573134,0.0007234397],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0007466339,0.0003214842,0.001979218,0.002187195,0.0002063346,0.0005560928,0.0001611345,0.001675234,0.0244297,0.00321358,0.842639,0.1218843],"study_design_scores_gemma":[0.0002498267,0.00008078069,0.002601346,0.0002710265,0.0001229039,0.00059883,0.00006114441,0.003970154,0.03393087,0.008985209,0.9489445,0.0001832006],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"software","genre_gemma":"methods","genre_scores_codex":[0.003549515,0.0009645284,0.157684,0.001334905,0.001686129,0.001587784,0.3293971,0.4414178,0.06237831],"genre_scores_gemma":[0.01331384,0.00109169,0.2093136,0.001670977,0.0004647134,0.003140101,0.6541532,0.05560555,0.06124637],"genre_candidate":"methods","genre_consensus":null,"teacher_disagreement_score":0.2562745,"threshold_uncertainty_score":0.8573235,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03331719160713126,"score_gpt":0.3072731998607921,"score_spread":0.2739560082536608,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}