{"id":"W2127302438","doi":"10.1093/glycob/cwl010","title":"Elucidation of the CMP-pseudaminic acid pathway in Helicobacter pylori: synthesis from UDP-N-acetylglucosamine by a single enzymatic reaction","year":2006,"lang":"en","type":"article","venue":"Glycobiology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":165,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute for Biological Sciences","funders":"Genomic Health","keywords":"Flagellin; Enzyme; Biochemistry; Sialic acid; Chemistry; Acetylglucosamine; Nucleotide sugar; Glycosylation; Helicobacter pylori; Biosynthesis; Bacteria; N-Acetylglucosamine; Amino sugar; Glycan; Glycosyltransferase; Microbiology; Stereochemistry; Glycoprotein; Biology; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001416117,0.0002999928,0.0001180934,0.0001175693,0.00009489906,0.0001794534,0.0001604044,0.0002301301,0.0002625716],"category_scores_gemma":[0.0001355465,0.00009718868,0.0001614275,0.0001350259,0.0001660423,0.0002356336,0.0001514931,0.0002955139,0.0001574684],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001873939,"about_ca_system_score_gemma":0.0002783089,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001014593,"about_ca_topic_score_gemma":0.001049529,"domain_scores_codex":[0.9999522,0.000009532871,0.00000371371,0.00001082093,0.00001131753,0.00001239174],"domain_scores_gemma":[0.9999416,0.000006830355,0.00001791292,0.000006589255,0.00001216633,0.00001489691],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001336014,0.00002611182,0.0009044706,0.0000507817,0.000006132371,0.0001031485,0.00003174234,0.0001697785,0.9947622,0.0001832223,0.00001623788,0.003612447],"study_design_scores_gemma":[0.000008563407,0.0004788543,0.006094139,0.000008905638,0.00002088984,0.0003183636,0.00005222337,0.001568737,0.9895006,0.00011477,0.001825844,0.00000809649],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9929662,0.001752865,0.004426341,0.00006226505,0.000009255156,0.00001707233,0.000120956,0.0000172766,0.0006278459],"genre_scores_gemma":[0.9913453,0.001545226,0.005652839,0.00002106609,0.000004709221,0.00001325544,0.0003694798,0.000007294327,0.001040781],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001014593,"threshold_uncertainty_score":0.002017379,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009384157761729904,"score_gpt":0.2220329077018456,"score_spread":0.2126487499401157,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}