{"id":"W2127380523","doi":"10.1093/molbev/msr243","title":"High Mutation Rates in the Mitochondrial Genomes of Daphnia pulex","year":2011,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"Evolution and Genetic Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":92,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Windsor","funders":"Division of Emerging Frontiers; Ontario Ministry of Research and Innovation; University of Edinburgh; National Institute of General Medical Sciences; University of Windsor; National Institutes of Health; National Science Foundation","keywords":"Biology; Daphnia pulex; Mitochondrial DNA; Mutation; Genome; Mutation rate; Pulex; Evolutionary biology; Genetics; Daphnia; Zoology; Gene; Crustacean","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001606299,0.0000942371,0.0000969832,0.00005703944,0.00004224406,0.000003317399,0.0001154317,0.0001714378,0.000008872484],"category_scores_gemma":[0.00004215814,0.00007461639,0.00004035161,0.00009284663,0.0001765163,0.000002618443,0.0000304801,0.00006183526,0.000002379584],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000007084694,"about_ca_system_score_gemma":0.00002782407,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000124072,"about_ca_topic_score_gemma":0.0001198918,"domain_scores_codex":[0.9992626,0.0001692687,0.0001779262,0.0002046599,0.00004377499,0.0001417891],"domain_scores_gemma":[0.9996812,0.000006829835,0.00006984163,0.0001774423,0.00004356538,0.00002113148],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001623118,0.0000856636,0.02744598,0.00001254197,0.00003151262,0.000003744372,0.0002946705,0.0000989898,0.9473594,0.02354484,0.00006871438,0.0008916028],"study_design_scores_gemma":[0.002654133,0.001599214,0.8236175,0.00001670227,0.00009058162,0.000118065,0.0008714203,0.000917321,0.1124536,0.05594353,0.001177339,0.0005406571],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9560803,0.001544617,0.04164291,0.00007186853,0.0001234066,0.0001551131,0.00001090398,0.000004217784,0.0003667236],"genre_scores_gemma":[0.9968677,0.00007884824,0.002671939,0.0001160818,0.00004516647,0.00001716107,0.0001673109,0.000006035809,0.00002977197],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8349059,"threshold_uncertainty_score":0.3042768,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00719420406063762,"score_gpt":0.2466286751172817,"score_spread":0.2394344710566441,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}