{"id":"W2127435259","doi":"10.1128/jb.187.4.1324-1333.2005","title":"Reconstitution of O-Specific Lipopolysaccharide Expression in <i>Burkholderia cenocepacia</i> Strain J2315, Which Is Associated with Transmissible Infections in Patients with Cystic Fibrosis","year":2005,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Cystic Fibrosis Research Advances","field":"Medicine","cited_by":72,"is_retracted":false,"has_abstract":true,"ca_institutions":"Western University","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Biology; Microbiology; Plasmid; Antigen; Burkholderia cenocepacia; Gene cluster; Gene; Molecular biology; Virology; Genetics; Virulence","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017061,0.0003425737,0.0002291597,0.0001252176,0.0001281264,0.0003569644,0.0002667015,0.000322705,0.0005473241],"category_scores_gemma":[0.0001880833,0.0001300442,0.0002646064,0.0001536122,0.000200065,0.0001502739,0.0002526864,0.0005993574,0.0002736275],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003085689,"about_ca_system_score_gemma":0.0002361925,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001316411,"about_ca_topic_score_gemma":0.0009339445,"domain_scores_codex":[0.9998191,0.0000353797,0.00002593792,0.00003343657,0.00003574046,0.00005042079],"domain_scores_gemma":[0.9998254,0.00002329698,0.00004956631,0.0000209371,0.00001478822,0.00006597749],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001577588,0.0001085236,0.0002451625,0.00002125639,0.000006415787,0.00004709505,0.00002848,0.00009442848,0.9986202,0.00007663156,0.00002011208,0.0005740039],"study_design_scores_gemma":[0.0001333928,0.002535917,0.01137242,0.00002159655,0.00004522264,0.000423668,0.0001389756,0.002291243,0.9791185,0.00007681004,0.00382894,0.00001350577],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9988023,0.0001532774,0.0004483442,0.0000379466,0.00001712788,0.00002836204,0.0002065288,0.00001538303,0.0002907912],"genre_scores_gemma":[0.9973806,0.0001408713,0.001070768,0.00004590197,0.000006012071,0.00003483961,0.0005498482,0.00001699752,0.000754161],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001316411,"threshold_uncertainty_score":0.002617538,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0119915497229552,"score_gpt":0.2586695030672367,"score_spread":0.2466779533442815,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}