{"id":"W2127471044","doi":"10.1093/nar/28.12.2342","title":"Evolutionary appearance of genes encoding proteins associated with box H/ACA snoRNAs: Cbf5p in Euglena gracilis, an early diverging eukaryote, and candidate Gar1p and Nop10p homologs in archaebacteria","year":2000,"lang":"en","type":"article","venue":"Nucleic Acids Research","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":82,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University; Canadian Institute for Advanced Research","funders":"","keywords":"Biology; Eukaryote; Pseudouridine; Euglena gracilis; Genetics; Gene; Euglena; Caulobacter crescentus; Haloferax volcanii; Transfer RNA; Genome; Archaea; RNA","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007439267,0.0002758203,0.0001726598,0.0009085672,0.0001652837,0.0003091337,0.0002037424,0.0004253809,0.0009570258],"category_scores_gemma":[0.0002201535,0.000159486,0.0002751041,0.0005135789,0.0001810573,0.0001934991,0.0003351111,0.0003743924,0.0003322959],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002476833,"about_ca_system_score_gemma":0.0001713611,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001067405,"about_ca_topic_score_gemma":0.001087223,"domain_scores_codex":[0.9998932,0.000006481157,0.000008028939,0.00004299981,0.00002059323,0.00002867573],"domain_scores_gemma":[0.99978,0.00003521298,0.0000713459,0.00001421689,0.00002447497,0.00007470437],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001776385,0.00001122756,0.006354456,0.00004632507,0.000009329241,0.0001687859,0.00006981827,0.00004109143,0.9901872,0.00005763824,0.00002383612,0.002852669],"study_design_scores_gemma":[0.0000224354,0.0003525968,0.8341401,0.00003778541,0.00008009782,0.002229776,0.000347677,0.001596234,0.1569557,0.000187274,0.004024842,0.00002543561],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.997712,0.0004353205,0.0004948662,0.00002808759,0.000005457979,0.000007115058,0.0008182583,0.00003067074,0.0004681248],"genre_scores_gemma":[0.9927301,0.0002839244,0.001820822,0.00007072225,0.000006703371,0.00002119065,0.003069604,0.00002222744,0.001974679],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001067405,"threshold_uncertainty_score":0.003201544,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01762349687351543,"score_gpt":0.2668652533647978,"score_spread":0.2492417564912823,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}