{"id":"W2127591287","doi":"10.1128/jb.182.21.6066-6074.2000","title":"Sequence of the Genome of the Temperate, Serotype-Converting, <i>Pseudomonas aeruginosa</i> Bacteriophage D3","year":2000,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":112,"is_retracted":false,"has_abstract":true,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada; European Bioinformatics Institute","keywords":"Biology; Siphoviridae; Bacteriophage; Temperateness; ORFS; Genetics; Gene; Integrase; Lysogenic cycle; Open reading frame; Genome; Lysin; Nucleic acid sequence; Peptide sequence; Escherichia coli","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001987335,0.0007610944,0.0006432223,0.0007400178,0.0005832401,0.0005865915,0.0003197216,0.000528971,0.002798164],"category_scores_gemma":[0.0004874246,0.0002382796,0.0006803682,0.00159632,0.0002883724,0.0002580433,0.0002840442,0.0008910729,0.002910123],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005981136,"about_ca_system_score_gemma":0.001008308,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.006723524,"about_ca_topic_score_gemma":0.004971879,"domain_scores_codex":[0.9998567,0.00001984673,0.00001243637,0.0000394139,0.00005087654,0.00002075531],"domain_scores_gemma":[0.9996624,0.00007375898,0.00006537738,0.00002444643,0.00007767823,0.00009629715],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001524852,0.0001280807,0.003036671,0.001143372,0.00004633018,0.0006145308,0.0003072226,0.0008088021,0.9656962,0.0006258978,0.003057143,0.02301096],"study_design_scores_gemma":[0.0004441014,0.001649496,0.3828301,0.0006314019,0.0005722984,0.004382862,0.0006392584,0.004334244,0.2537732,0.001994891,0.3485194,0.0002287916],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.6009435,0.01173772,0.03612353,0.0009524719,0.0003792196,0.0009566239,0.3293191,0.0008541365,0.01873358],"genre_scores_gemma":[0.369039,0.006417445,0.03816225,0.0006470899,0.0001406553,0.0003717121,0.5729044,0.0003297393,0.01198769],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006723524,"threshold_uncertainty_score":0.01336879,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01017476983475001,"score_gpt":0.2236115213975179,"score_spread":0.2134367515627679,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}