{"id":"W2127663377","doi":"10.1128/jvi.79.22.13865-13874.2005","title":"Transcriptional Regulation of Early Transposon Elements, an Active Family of Mouse Long Terminal Repeat Retrotransposons","year":2005,"lang":"en","type":"article","venue":"Journal of Virology","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":57,"is_retracted":false,"has_abstract":true,"ca_institutions":"Terry Fox Research Institute; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Retrotransposon; Long terminal repeat; Biology; Transposable element; Endogenous retrovirus; Promoter; Retrovirus; Embryonic stem cell; Transcriptional regulation; Genetics; Transcription factor; Transcription (linguistics); Molecular biology; Cell culture; Gene; Gene expression; Genome","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001482901,0.0003168671,0.0001358279,0.0002334319,0.0001173224,0.0002650832,0.0001425306,0.0001471288,0.0006885917],"category_scores_gemma":[0.0001607945,0.00008239299,0.0002005694,0.0001157245,0.0002075563,0.0001453016,0.0002046805,0.0002607467,0.0003081512],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000236584,"about_ca_system_score_gemma":0.0001358076,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002890489,"about_ca_topic_score_gemma":0.0004651033,"domain_scores_codex":[0.9998306,0.00002374239,0.00001204113,0.00006024619,0.00004910693,0.00002421665],"domain_scores_gemma":[0.9998749,0.0000292316,0.00003437519,0.0000136192,0.0000250154,0.00002279647],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002521131,0.000007708566,0.0006938265,0.00001910093,0.000001765391,0.00004091161,0.0000237302,0.00002680476,0.9970278,0.0001716869,0.00001928613,0.001942117],"study_design_scores_gemma":[0.000008830929,0.0001877017,0.02392617,0.00001431732,0.0000151247,0.0004316969,0.00007444579,0.001153355,0.9686979,0.0002028591,0.00528137,0.000006314438],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9795367,0.004819712,0.0109917,0.00009048318,0.00004505883,0.00002883855,0.0007936062,0.0001825352,0.003511396],"genre_scores_gemma":[0.9872847,0.001595098,0.004680955,0.00005043239,0.00001949516,0.0000233882,0.00118279,0.0000312988,0.005131781],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0006885917,"threshold_uncertainty_score":0.002303541,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01969734666149977,"score_gpt":0.2386551469547154,"score_spread":0.2189578002932156,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}