{"id":"W2127787621","doi":"10.1073/pnas.0404163101","title":"Genome-wide molecular dissection of serotype M3 group A <i>Streptococcus</i> strains causing two epidemics of invasive infections","year":2004,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":128,"is_retracted":false,"has_abstract":true,"ca_institutions":"Mount Sinai Hospital","funders":"","keywords":"Biology; Genotyping; Prophage; Serotype; Virulence; Genotype; Genome; Population; Genetics; Streptococcus pyogenes; Virology; Gene; Microbiology; Bacteria; Bacteriophage; Staphylococcus aureus; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002919365,0.0001697822,0.0001996922,0.000346641,0.0003452062,0.0003592762,0.0001389599,0.0002366786,0.00040907],"category_scores_gemma":[0.0007220522,0.0001264168,0.0001952965,0.0003568436,0.0002353132,0.0001035558,0.000179317,0.0003353041,0.00006976364],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009255348,"about_ca_system_score_gemma":0.000673549,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.03436578,"about_ca_topic_score_gemma":0.05194702,"domain_scores_codex":[0.9998356,0.00002570549,0.000009393422,0.00003794151,0.00004482308,0.00004645641],"domain_scores_gemma":[0.9997033,0.00005820688,0.00008646018,0.00002444515,0.00005490829,0.00007268073],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0007090261,0.00007266106,0.9218902,0.00002397986,0.00007234589,0.0003327497,0.0006064887,0.0002121881,0.06900819,0.00006755802,0.000200211,0.006804395],"study_design_scores_gemma":[0.000006340437,0.00007084168,0.9979539,0.000002051067,0.00001650712,0.0003171714,0.0001806926,0.0001813967,0.001055812,0.00001083216,0.0002022751,0.000002143649],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9997291,0.0000378398,0.00006440291,0.0000145426,4.022352e-7,0.000002694106,0.00006691321,0.00000137194,0.00008269608],"genre_scores_gemma":[0.9993525,0.00004975485,0.0001666064,0.00002049153,0.000002123014,0.000003484834,0.0003226635,0.000001554352,0.00008081386],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03436578,"threshold_uncertainty_score":0.06833148,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04096846633039057,"score_gpt":0.3332133149244852,"score_spread":0.2922448485940946,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}