{"id":"W2127854361","doi":"10.1128/aem.00391-09","title":"<i>Escherichia coli</i> O157:H7 Strain Origin, Lineage, and Shiga Toxin 2 Expression Affect Colonization of Cattle","year":2009,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":35,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada; University of Lethbridge","funders":"Agriculture and Agri-Food Canada","keywords":"Biology; Lineage (genetic); Colonization; Microbiology; Escherichia coli; Shiga toxin; Strain (injury); Virulence; Pathogen; Toxin; Enterobacteriaceae; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002022586,0.0002296711,0.0002151071,0.0001728074,0.00008500545,0.0004317535,0.0001053071,0.0002944623,0.0006550533],"category_scores_gemma":[0.000314127,0.0001360786,0.0001636509,0.0001619749,0.0002124974,0.0001937064,0.0001614406,0.0003461275,0.0001737546],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003695234,"about_ca_system_score_gemma":0.0001566757,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001111764,"about_ca_topic_score_gemma":0.002102885,"domain_scores_codex":[0.9997551,0.00007391786,0.00001533457,0.00004387553,0.00003322328,0.00007850931],"domain_scores_gemma":[0.9996336,0.00009886923,0.0001326248,0.00001191801,0.00003524349,0.00008778629],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005420839,0.00005347441,0.01057163,0.00002854287,0.0000115862,0.00005097496,0.00004476075,0.00005355955,0.9877828,0.00001552177,0.00002754699,0.0008174999],"study_design_scores_gemma":[0.00002500886,0.002559641,0.5400164,0.00002155911,0.00008139265,0.0005285288,0.0004722315,0.001455518,0.4532479,0.00006101564,0.001512486,0.00001834184],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9994826,0.0002360268,0.00005610931,0.00001002026,0.000001342968,0.000001974662,0.0000540622,0.000001916611,0.0001558051],"genre_scores_gemma":[0.9987294,0.0002462585,0.000274784,0.00004136727,0.00000368969,0.00000505263,0.0002493673,0.000005147785,0.0004449623],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001111764,"threshold_uncertainty_score":0.002681077,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005639155409102155,"score_gpt":0.2233163984567171,"score_spread":0.217677243047615,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}