{"id":"W2127865724","doi":"10.1128/iai.00137-15","title":"Bistable Expression of CsgD in Salmonella enterica Serovar Typhimurium Connects Virulence to Persistence","year":2015,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":65,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Regina; University of Saskatchewan","funders":"","keywords":"Virulence; Biology; Salmonella enterica; Biofilm; Microbiology; Salmonella; Pathogen; Transcriptome; Gene; Bacteria; Serotype; Type three secretion system; Pathogenicity island; Gene expression; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005949868,0.0001632535,0.0001268169,0.0002178219,0.00009435548,0.0002086267,0.0000729923,0.0002258852,0.0002789523],"category_scores_gemma":[0.0001093278,0.0001128995,0.0001427557,0.0002066556,0.0001678618,0.0001400826,0.000204173,0.0001886924,0.00009418253],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002281153,"about_ca_system_score_gemma":0.0001514501,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0012223,"about_ca_topic_score_gemma":0.001502469,"domain_scores_codex":[0.9999279,0.00000781578,0.000004125022,0.0000261058,0.00001408778,0.0000200157],"domain_scores_gemma":[0.9999253,0.00001169983,0.00002672716,0.000006592932,0.00001177464,0.00001795779],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005028595,0.000007349757,0.003147607,0.00002414194,0.000002776126,0.00002462428,0.00002616685,0.0001353244,0.99559,0.00004953,0.00002282994,0.0009193744],"study_design_scores_gemma":[0.00001131446,0.0003676756,0.4907806,0.00002740923,0.00004266521,0.0003629383,0.0007192487,0.01171425,0.4926539,0.000564724,0.002725032,0.00003016255],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.998297,0.0002470177,0.00095281,0.00003492444,0.000004094332,0.000002087273,0.0002175054,0.00001606519,0.0002285488],"genre_scores_gemma":[0.9983664,0.0001261556,0.0007122081,0.00002997568,0.00000154975,0.000004552419,0.0003255854,0.000005361314,0.0004282465],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0012223,"threshold_uncertainty_score":0.002430379,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07453383692765372,"score_gpt":0.2587111652888586,"score_spread":0.1841773283612049,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}