{"id":"W2128024232","doi":"10.1186/1471-2164-11-438","title":"Pig genome sequence - analysis and publication strategy","year":2010,"lang":"en","type":"letter","venue":"BMC Genomics","topic":"Genetic Mapping and Diversity in Plants and Animals","field":"Biochemistry, Genetics and Molecular Biology","cited_by":162,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Biotechnology and Biological Sciences Research Council; University of Illinois at Urbana-Champaign; National Institute of Food and Agriculture; Directorate for Biological Sciences; Institut National de la Recherche Agronomique; North Carolina Pork Council; Agricultural Research Service; Agence Nationale de la Recherche; Wellcome Trust; European Commission; Iowa Pork Producers Association; U.S. Department of Agriculture; North Carolina State University; Iowa State University","keywords":"Ensembl; Shotgun sequencing; Genome; Whole genome sequencing; Reference genome; Biology; Sequence assembly; Genome project; Genetics; Computational biology; DNA sequencing; Genomics; Gene","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001369666,0.00022694,0.0002439055,0.0001426743,0.0001154935,0.0001543796,0.0003023648,0.00114314,0.00007858624],"category_scores_gemma":[0.00003015731,0.0002307297,0.0001437034,0.0001094539,0.00008792098,0.000002350442,0.000149502,0.0005633259,0.00002598821],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001147233,"about_ca_system_score_gemma":0.0001447769,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008989277,"about_ca_topic_score_gemma":0.0001307384,"domain_scores_codex":[0.9988402,0.00004021027,0.0002003667,0.0005396777,0.000112201,0.0002673601],"domain_scores_gemma":[0.9991735,0.0000116589,0.000166854,0.0004618031,0.0001127917,0.00007338489],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00002312087,0.00002689518,0.005304573,0.0001494188,0.0007858382,0.00001902476,0.00005740535,0.0001403359,0.4738203,0.00002573038,0.5186221,0.001025253],"study_design_scores_gemma":[0.0001190711,0.00006199813,0.002948351,0.000002067043,0.0003431698,0.00001776806,0.00002030709,0.00007329993,0.001163672,0.00004656952,0.994874,0.0003297558],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"empirical","genre_gemma":"commentary","genre_scores_codex":[0.891403,0.002379598,0.00663877,0.08250461,0.0008757329,0.0008757351,0.00470376,0.00008540509,0.01053335],"genre_scores_gemma":[0.2750857,0.004292247,0.01616452,0.5407383,0.01196608,0.00006745727,0.07103516,0.0001819313,0.08046863],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.6163173,"threshold_uncertainty_score":0.9408882,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02932135493940018,"score_gpt":0.237445532071526,"score_spread":0.2081241771321258,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}