{"id":"W2128519370","doi":"10.1128/aem.03462-12","title":"Legionella pneumophila Transcriptional Response following Exposure to CuO Nanoparticles","year":2013,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Legionella and Acanthamoeba research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Legionella pneumophila; Microbiology; Virulence; Gene; Bacteria; Biology; Gene expression; Transcriptome; Transcription (linguistics); Real-time polymerase chain reaction; Microarray; Legionella; Molecular biology; Chemistry; Biochemistry; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001195348,0.000154093,0.0001290985,0.00003796862,0.0001297913,0.00002149167,0.0001227434,0.0001392148,0.00004615624],"category_scores_gemma":[0.000004445817,0.0001396304,0.00006180312,0.00003511854,0.0001477024,0.000004465672,0.0001263658,0.00007854686,0.0002054539],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000156935,"about_ca_system_score_gemma":0.00001288515,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001142847,"about_ca_topic_score_gemma":0.000002292506,"domain_scores_codex":[0.9990315,0.00005187929,0.0001499507,0.0003926589,0.00004737412,0.0003266579],"domain_scores_gemma":[0.9996483,0.0000161986,0.00002002513,0.0001744273,0.00000297271,0.0001380886],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001805203,0.00005479827,0.001687419,0.00000285945,0.00003112343,0.000003006101,0.00008945305,0.00001451092,0.9959509,0.00004497674,0.0009967774,0.0009436992],"study_design_scores_gemma":[0.0009851793,0.0005124122,0.02856706,0.000004802705,0.00001236247,0.00008318698,0.0004902294,0.000003408619,0.9156445,0.000108971,0.05326567,0.0003221927],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981632,0.0003995295,0.0000403922,0.0008328959,0.000066252,0.0002933007,0.00002545722,0.000009076118,0.0001698871],"genre_scores_gemma":[0.99775,0.00008115961,0.0002047492,0.001062607,0.00008204437,0.00008465766,0.0001573794,0.00001938578,0.0005579581],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08030634,"threshold_uncertainty_score":0.5693961,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005658654596448696,"score_gpt":0.1970804458052766,"score_spread":0.1914217912088279,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}