{"id":"W2128671556","doi":"10.1128/iai.73.8.4982-4992.2005","title":"Characterization of the <i>cciIR</i> Quorum-Sensing System in <i>Burkholderia cenocepacia</i>","year":2005,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":95,"is_retracted":false,"has_abstract":true,"ca_institutions":"Calgary General Hospital; University of Calgary","funders":"Coalition for Epidemic Preparedness Innovations; Wellcome Trust; Cystic Fibrosis Trust; Cystic Fibrosis Foundation","keywords":"Biology; Bioreporter; Burkholderia cenocepacia; Mutant; Quorum sensing; Swarming motility; Protease; Gene; Microbiology; Genetics; Reporter gene; Gene expression; Molecular biology; Biochemistry; Virulence","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001645426,0.00008275966,0.00009892185,0.00002877898,0.0001071182,0.00001977804,0.00003665558,0.0001028144,0.000002917605],"category_scores_gemma":[0.00002234121,0.00006751107,0.00003723963,0.0001029408,0.00005254935,0.000009454595,0.00006489178,0.00008597074,0.000001253191],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001703107,"about_ca_system_score_gemma":0.0000194511,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003200271,"about_ca_topic_score_gemma":0.0002588891,"domain_scores_codex":[0.9994493,0.0001062709,0.0001854289,0.0001078173,0.00004430872,0.0001069273],"domain_scores_gemma":[0.9996439,0.000004062647,0.0001014794,0.0001855805,0.00004504644,0.00001993503],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002400278,0.00002012102,0.004659496,0.00001790687,0.00000594501,7.873168e-8,0.00005752987,0.000003504884,0.9885014,0.00003956255,0.00001154353,0.006658894],"study_design_scores_gemma":[0.0002649278,0.00003514871,0.1089377,0.00004785257,0.000005774963,0.00002486411,0.00003630149,0.00005439793,0.8782981,8.229613e-7,0.01221801,0.0000761248],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986662,0.0000348725,0.00005370909,0.00009072093,0.0002909063,0.0001063014,0.000006676366,0.00001011212,0.0007405527],"genre_scores_gemma":[0.9995229,0.00009128566,0.00003939555,0.0001414628,0.0001217932,7.430328e-7,0.00002716568,0.000008093557,0.00004711908],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1102033,"threshold_uncertainty_score":0.2753022,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006712915774728959,"score_gpt":0.2053448143255255,"score_spread":0.1986318985507966,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}