{"id":"W2128716096","doi":"10.1101/sqb.2013.77.014969","title":"Reprogramming the Epigenome in Arabidopsis Pollen","year":2012,"lang":"en","type":"review","venue":"Cold Spring Harbor Symposia on Quantitative Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":28,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; National Institute of General Medical Sciences; Fred C. Gloeckner Foundation; Gordon and Betty Moore Foundation; Howard Hughes Medical Institute","keywords":"Reprogramming; Biology; Epigenome; DNA methylation; Epigenetics; DNA demethylation; Arabidopsis; Genetics; Arabidopsis thaliana; Microspore; Gametophyte; Gametogenesis; Double fertilization; Cell biology; Pollen; Gene; Pollen tube; Gene expression; Botany; Pollination; Embryogenesis","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000210703,0.0005476024,0.0004667277,0.001000554,0.0001661634,0.0005452125,0.0005263642,0.0005585034,0.002563064],"category_scores_gemma":[0.0001502933,0.0001630049,0.0001547032,0.001015338,0.0002793089,0.0006330156,0.0004638499,0.0005767755,0.002522752],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004337014,"about_ca_system_score_gemma":0.0004633103,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008906493,"about_ca_topic_score_gemma":0.001248285,"domain_scores_codex":[0.9999453,0.000007062923,0.000005854002,0.00001386952,0.00002273411,0.000005228611],"domain_scores_gemma":[0.9999522,0.000009414526,0.00001125428,0.000002508715,0.00001314772,0.00001161576],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00005631352,0.00002417618,0.000166914,0.006447557,0.00003265053,0.0002768787,0.00005079174,0.0004434313,0.01988633,0.00350018,0.01331366,0.9558011],"study_design_scores_gemma":[0.000009396078,0.00007501619,0.002078311,0.0007989504,0.00004578429,0.0009847964,0.00004007875,0.00009514695,0.003523906,0.001521784,0.9908147,0.00001213476],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0006824466,0.9953703,0.0003170958,0.0001716953,0.0001259171,0.000005347596,0.00003157268,0.00001740589,0.003278187],"genre_scores_gemma":[0.004332795,0.9920143,0.0004668051,0.0002010428,0.0001508482,0.00001267297,0.00007606783,0.000004268604,0.002741186],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.002563064,"threshold_uncertainty_score":0.008574307,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1029270645170483,"score_gpt":0.3435476774967101,"score_spread":0.2406206129796618,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}