{"id":"W2129047558","doi":"10.1016/j.mycres.2009.03.003","title":"Multigene phylogeny of filamentous ambrosia fungi associated with ambrosia and bark beetles","year":2009,"lang":"en","type":"article","venue":"Mycological Research","topic":"Forest Insect Ecology and Management","field":"Environmental Science","cited_by":107,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Biology; Phylogenetic tree; Taxonomy (biology); Botany; Phylogenetics; Taxon; Ambrosia; Cladistics; Genus; Zoology; Gene; Pollen; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"observational","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"low","status":"direct model label, unvalidated"},{"model":"gpt","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"high","status":"direct model label, unvalidated"}],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001032799,0.0001250064,0.0002086668,0.00006910312,0.0002434907,0.00002398405,0.00028233,0.0001557944,0.001713349],"category_scores_gemma":[0.00036775,0.0000866235,0.00003281362,0.0004686602,0.0007681187,0.00007062074,0.0002553476,0.0002971283,0.0001189735],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001434097,"about_ca_system_score_gemma":0.00001256082,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001142647,"about_ca_topic_score_gemma":0.0003291499,"domain_scores_codex":[0.99809,0.0002600831,0.0001859573,0.0003746134,0.0005249102,0.0005644478],"domain_scores_gemma":[0.999195,0.0003709732,0.00005491222,0.000201372,0.00003190883,0.0001458831],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001624704,0.0004168213,0.000452297,0.000004679082,0.00001812023,0.00005035961,0.00009099699,0.0001426001,0.9919237,0.0009007061,0.002643639,0.003193609],"study_design_scores_gemma":[0.0004746265,0.002089519,0.993026,0.00001262416,0.000008394498,0.000002988774,0.00005742735,0.000244497,0.001713038,0.001411078,0.0008539797,0.0001058543],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9904767,0.0001269908,0.0000267379,0.000002953157,0.00001725103,0.000454479,0.000006933325,0.00002970371,0.008858257],"genre_scores_gemma":[0.997722,0.0001431233,0.0004462882,0.0002613353,0.00001110868,0.00003837898,0.000008512015,0.000005992834,0.00136326],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9925737,"threshold_uncertainty_score":0.9991992,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03630152325716678,"score_gpt":0.303502518888759,"score_spread":0.2672009956315922,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}