{"id":"W2129385232","doi":"10.1128/jb.187.20.6893-6901.2005","title":"Genetic Analysis Identifies a Function for the <i>queC</i> ( <i>ybaX</i> ) Gene Product at an Initial Step in the Queuosine Biosynthetic Pathway in <i>Escherichia coli</i>","year":2005,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institute of Genetics; Council of Scientific and Industrial Research, India; Indian Council of Medical Research","keywords":"Biology; Escherichia coli; Genetics; Gene; Function (biology); Product (mathematics); Gene product; Escherichia coli Proteins; Computational biology; Gene expression","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001050688,0.0002320909,0.0004355248,0.0002199771,0.0001083022,0.00005161805,0.0005847266,0.0003042726,0.000021157],"category_scores_gemma":[0.0001051939,0.0001441139,0.0002456088,0.0004231482,0.0002142088,0.00001417116,0.0001146622,0.0002688123,0.000002383774],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005174894,"about_ca_system_score_gemma":0.0001191446,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004880612,"about_ca_topic_score_gemma":0.003548787,"domain_scores_codex":[0.9979417,0.0003955119,0.0008090951,0.000359773,0.0001272098,0.0003667023],"domain_scores_gemma":[0.9987494,0.00007209313,0.0004572074,0.000512476,0.0001576185,0.00005125388],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0009083627,0.0001862225,0.002004611,0.000009790681,0.0002098634,0.000007912059,0.0001065063,0.000537615,0.9895738,0.00001445525,0.0001889264,0.006251948],"study_design_scores_gemma":[0.002529446,0.003368366,0.1564071,0.0000208711,0.0005862928,0.0004257672,0.0002337956,0.0005086075,0.6626245,0.0001180024,0.1727051,0.0004720688],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.993473,0.002156695,0.001128591,0.002289543,0.0004830328,0.0004160221,0.00003381948,0.000004292021,0.0000150203],"genre_scores_gemma":[0.9955395,0.0008291242,0.001100299,0.001316992,0.001061105,0.00004744597,0.00004950017,0.00002201441,0.00003405039],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3269492,"threshold_uncertainty_score":0.5876794,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01099289494959145,"score_gpt":0.2391508992148928,"score_spread":0.2281580042653013,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}