{"id":"W2129600735","doi":"10.1016/j.jprot.2014.07.005","title":"Compositional complexity of the mitochondrial proteome of a unicellular eukaryote (Acanthamoeba castellanii, supergroup Amoebozoa) rivals that of animals, fungi, and plants","year":2014,"lang":"en","type":"article","venue":"Journal of Proteomics","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":57,"is_retracted":false,"has_abstract":false,"ca_institutions":"Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada; Genome Canada; Tula Foundation; Canadian Institutes of Health Research; Killam Trusts; Fistula Foundation","keywords":"Biology; Proteome; Eukaryote; Mitochondrial DNA; Mitochondrion; Genetics; Ribosomal protein; Glyoxylate cycle; Genome; Cell biology; Gene; RNA; Ribosome; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009504332,0.0001576664,0.0002036866,0.0005193984,0.0003863423,0.0004260852,0.0001695366,0.0002758784,0.001263764],"category_scores_gemma":[0.0002856726,0.0001753656,0.0001944843,0.0003504326,0.0001997912,0.0004726953,0.0003032387,0.0003528718,0.0002451971],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001715321,"about_ca_system_score_gemma":0.0001977319,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001346211,"about_ca_topic_score_gemma":0.002240817,"domain_scores_codex":[0.9999135,0.000008547341,0.00000480026,0.00002581234,0.00002462784,0.00002274351],"domain_scores_gemma":[0.9997413,0.00005025748,0.00007113403,0.0000162689,0.00004297381,0.00007800075],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001804726,0.000008884518,0.00478454,0.00004761959,0.00001916263,0.00006294424,0.00007078868,0.00003681962,0.9929094,0.0001516579,0.00005991879,0.001667648],"study_design_scores_gemma":[0.00001298925,0.0001896468,0.9066216,0.00001783035,0.00007859987,0.001400212,0.0004242908,0.002089919,0.08589806,0.0005992556,0.002650446,0.00001701538],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985321,0.0005159096,0.0002667733,0.0000539019,0.000003877278,0.000001232332,0.0002943075,0.000007134773,0.0003247389],"genre_scores_gemma":[0.9975693,0.0003018296,0.0004239557,0.00005097932,0.0000119946,0.000002863407,0.001056765,0.000009606028,0.0005727523],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001346211,"threshold_uncertainty_score":0.004227698,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02125914580614285,"score_gpt":0.2154093349974668,"score_spread":0.194150189191324,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}