{"id":"W2129613765","doi":"10.1111/imr.12213","title":"Epigenomics of macrophages","year":2014,"lang":"en","type":"review","venue":"Immunological Reviews","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":59,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Cancer Institute; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Enhancer; Biology; Epigenomics; Transcription factor; Enhancer RNAs; Transcriptome; Cell biology; Computational biology; Transcription (linguistics); Regulation of gene expression; Cell type; Gene; Genetics; Gene expression; Cell; DNA methylation","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007325805,0.000368572,0.001921497,0.00005239823,0.0000378214,0.00001307894,0.0004886151,0.0006117182,0.00005677937],"category_scores_gemma":[0.0006373556,0.0002451488,0.0009115014,0.0001206091,0.0001252006,8.952139e-7,0.000232389,0.0002105757,0.0001471986],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001650518,"about_ca_system_score_gemma":0.00006405191,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000002079405,"about_ca_topic_score_gemma":5.74687e-7,"domain_scores_codex":[0.9976264,0.0005448719,0.001075774,0.0004379344,0.00008456693,0.0002304591],"domain_scores_gemma":[0.9982599,0.00005864872,0.0008081243,0.0007706498,0.00005335401,0.00004929929],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000003354884,0.00002777993,4.208374e-7,0.003130103,0.00005397013,5.103984e-7,0.000001183836,2.577015e-7,0.001119304,0.00009618734,0.00005846934,0.9955084],"study_design_scores_gemma":[0.00006138555,0.0002463148,0.000003748496,0.001489241,0.0001822557,0.000003158866,4.492024e-7,1.902754e-7,0.0006024857,0.00006702489,0.9970957,0.0002480636],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.000013232,0.9970079,0.0008388249,0.000003033357,0.000179045,0.0006793111,0.00002239423,0.00000652148,0.001249738],"genre_scores_gemma":[0.00001075039,0.9977239,0.00112599,0.00001727853,0.0001800161,0.00008939487,0.0003105127,0.00003480199,0.0005073941],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9970372,"threshold_uncertainty_score":0.9996876,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06522768605023142,"score_gpt":0.3781571345133543,"score_spread":0.3129294484631228,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}