{"id":"W2129621365","doi":"10.1186/s12870-014-0282-7","title":"Genome-wide analysis of Cyclophilin gene family in soybean (Glycine max)","year":2014,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Signaling Pathways in Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada; Western University","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Genome; Gene; Gene family; Genetics; Gene duplication; Cyclophilin; Tandem exon duplication; Intron; Functional divergence","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001225716,0.0001625895,0.0001956536,0.0006850143,0.0001576575,0.0001569681,0.00007880503,0.0001462768,0.0008996688],"category_scores_gemma":[0.0001186819,0.00005850054,0.0002233953,0.0007256175,0.00007804544,0.000059591,0.0001281303,0.0001503833,0.000160462],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001359762,"about_ca_system_score_gemma":0.0001070775,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001512608,"about_ca_topic_score_gemma":0.002919389,"domain_scores_codex":[0.9999191,0.000005185535,0.000004592792,0.0000441345,0.00001764852,0.000009270347],"domain_scores_gemma":[0.9998903,0.00002018843,0.00004208267,0.000004731566,0.00001621947,0.00002639831],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0008765595,0.0000454472,0.4144097,0.0004541792,0.0002569587,0.0006444185,0.0002316312,0.0003760569,0.5650507,0.0001121644,0.0009779717,0.0165641],"study_design_scores_gemma":[0.000007815223,0.0000431704,0.9953803,0.000007181706,0.00005622734,0.0003847562,0.00004373309,0.0001988865,0.002680782,0.00002350319,0.001171172,0.000002468963],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9916466,0.00115801,0.0003598034,0.00003849766,0.000005007792,0.000008088639,0.006296983,0.00002129845,0.0004657031],"genre_scores_gemma":[0.9839531,0.0005750449,0.001096006,0.00005567314,0.00000755906,0.00002400799,0.01379298,0.00001056938,0.0004851229],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001512608,"threshold_uncertainty_score":0.003009677,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01538288385860275,"score_gpt":0.2401843261340424,"score_spread":0.2248014422754396,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}