{"id":"W2129636027","doi":"10.3354/dao054219","title":"Molecular detection of the oyster parasite Mikrocytos mackini, and a preliminary phylogenetic analysis","year":2003,"lang":"en","type":"article","venue":"Diseases of Aquatic Organisms","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":79,"is_retracted":false,"has_abstract":true,"ca_institutions":"Fisheries and Oceans Canada","funders":"Fisheries and Oceans Canada; Natural Sciences and Engineering Research Council of Canada; Cooperative State Research, Education, and Extension Service; New Hampshire Sea Grant, University of New Hampshire; University of Massachusetts Dartmouth; Dartmouth College; U.S. Department of Agriculture","keywords":"Biology; Histopathology; Ribosomal DNA; Crassostrea; Phylogenetic tree; Ostrea edulis; Parasite hosting; Polymerase chain reaction; 18S ribosomal RNA; Oyster; Ribosomal RNA; Genetics; Gene; Pathology; Ecology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005991358,0.000109151,0.0002370348,0.0001026785,0.00007972623,0.000005065479,0.00007958466,0.00008319248,0.0002795096],"category_scores_gemma":[0.0003032484,0.00008264932,0.0001397209,0.0003444059,0.0002155139,0.00002061826,0.00002850772,0.00005479703,0.00002944119],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001062776,"about_ca_system_score_gemma":0.00004107639,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003676978,"about_ca_topic_score_gemma":0.000006861037,"domain_scores_codex":[0.9992414,0.0001897544,0.0002389828,0.0001545673,0.00004292129,0.0001323821],"domain_scores_gemma":[0.9992951,0.0001971539,0.0001466572,0.0002932775,0.00004629386,0.00002152055],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006804781,0.0004055577,0.334939,0.00006677916,0.001260502,0.000003935863,0.0002246014,0.0002813232,0.6609814,0.0006238315,0.00001717014,0.001127798],"study_design_scores_gemma":[0.0005110402,0.0002086713,0.3677284,0.00001699935,0.002313631,0.00001721113,0.0001064488,0.00004700094,0.6285286,0.0003889863,0.00003907099,0.00009392406],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9928141,0.002844849,0.003834441,0.00001277867,0.0000945617,0.0001908607,0.0000448971,0.000009522976,0.0001539853],"genre_scores_gemma":[0.999787,0.00002164257,0.00005217609,0.0000397382,0.000002871356,0.00001144448,0.00001168876,0.000008546062,0.00006488942],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03278938,"threshold_uncertainty_score":0.3370341,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004034511575970331,"score_gpt":0.2120744677470495,"score_spread":0.2080399561710792,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}