{"id":"W2129681136","doi":"10.1128/jb.187.16.5648-5657.2005","title":"FpvIR Control of <i>fpvA</i> Ferric Pyoverdine Receptor Gene Expression in <i>Pseudomonas aeruginosa</i> : Demonstration of an Interaction between FpvI and FpvR and Identification of Mutations in Each Compromising This Interaction","year":2005,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":66,"is_retracted":false,"has_abstract":true,"ca_institutions":"Queen's University","funders":"Canadian Institutes of Health Research","keywords":"Sigma factor; Biology; Pyoverdine; Mutant; Binding site; Gene; Biochemistry; Transcription factor; Genetics; Gene expression; Promoter","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004291996,0.0001119565,0.0003725701,0.0002675037,0.00001923229,0.0000087424,0.00009385356,0.0002640908,0.000006598653],"category_scores_gemma":[0.00007232721,0.0001057662,0.00004562562,0.00009972752,0.0001353165,0.00004719575,0.00003971946,0.00017655,1.462061e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002596271,"about_ca_system_score_gemma":0.00004525332,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000335827,"about_ca_topic_score_gemma":0.00007013533,"domain_scores_codex":[0.9984761,0.0001968053,0.0009778826,0.0001760779,0.00006817218,0.000104933],"domain_scores_gemma":[0.9985901,0.00004741739,0.00104129,0.0001264626,0.000158047,0.00003665304],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004930813,0.0001232979,0.02074062,0.00002634359,0.00002688077,5.393532e-7,0.0001213235,0.0001406216,0.9673531,0.000006696622,0.000004411334,0.0109631],"study_design_scores_gemma":[0.00131439,0.0007856946,0.09244305,0.00007056825,0.0000293793,0.00006398484,0.0001274064,0.0002649717,0.9046051,0.0000313781,0.0001871538,0.00007693132],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.997761,0.0002759282,0.001428768,0.0002047842,0.0001445375,0.0001435083,0.00002925869,0.000001638,0.0000106305],"genre_scores_gemma":[0.9969918,0.0004758643,0.002312519,0.00001498059,0.0001195241,0.000002791249,0.00007123598,0.000008405341,0.000002924849],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07170243,"threshold_uncertainty_score":0.4313019,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00961872600373597,"score_gpt":0.2589454622614381,"score_spread":0.2493267362577021,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}